RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TBCELQ5QJ74 424 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 RWDD4Q6NW29 188 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 CPXCR1Q8N123 301 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 KLF6Q99612 283 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 TMEM47Q9BQJ4 181 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 YIPF2Q9BWQ6 316 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ING3Q9NXR8 418 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 V9GYQ6 96 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 PLCH1Q4KWH8 1693 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 KIAA2026Q5HYC2 2103 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 HNRNPH3P31942 346 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ACTR2P61160 394 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 FOXO4P98177 505 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 UNC45BQ8IWX7 931 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 RTL3Q8N8U3 475 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 DENND2DQ9H6A0 471 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 S100A14Q9HCY8 104 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 RBAKQ9NYW8 714 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 PCSK1NQ9UHG2 260 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 PCDHA3Q9Y5H8 950 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 TYW5A2RUC4 315 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 MTRF1O75570 445 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 PDGFRBP09619 1106 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 CCT3P49368 545 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 RTP1P59025 263 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 NAB1Q13506 487 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 C6orf10Q5SRN2 563 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ATG14Q6ZNE5 492 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 SYTL1Q8IYJ3 562 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 PRPF19Q9UMS4 504 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 RGPD3A6NKT7 1758 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 PSMD3O43242 534 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 DCXO43602 365 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ITGA2BP08514 1039 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 HOXD12P35452 270 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 KRT20P35900 424 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 DGKDQ16760 1214 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ZC3H12BQ5HYM0 836 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 TTC30BQ8N4P2 665 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 DDX17Q92841 729 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ZNF221Q9UK13 617 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 LRRC42Q9Y546 428 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ARHGAP23Q9P227 1491 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 MDC1Q14676 2089 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 BMP6P22004 513 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 PPM1FP49593 454 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 SERPINH1P50454 418 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 RNF19BQ6ZMZ0 732 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ARMCX2Q7L311 632 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 DCP1AQ9NPI6 582 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 TLR2O60603 784 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ENO2P09104 434 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 SFNP31947 248 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ADAM17P78536 824 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 TTLL12Q14166 644 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 FRG1Q14331 258 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 AGAP9Q5VTM2 703 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 NEK5Q6P3R8 708 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 SLC22A9Q8IVM8 553 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 RGPD4Q7Z3J3 1758 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 METP08581 1390 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 DENND3A2RUS2 1198 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 NOTOA8MTQ0 251 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 RBAK-RBAKDNI3L0D1 243 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 MPOP05164 745 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 RALBP11234 206 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 DDX5P17844 614 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 OLR1P78380 273 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 AMER2Q8N7J2 671 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ZSCAN18Q8TBC5 510 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 FEZF2Q8TBJ5 459 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 FAM118BQ9BPY3 351 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 RTKNQ9BST9 563 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 WDR41Q9HAD4 459 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 MAGEE1Q9HCI5 957 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 SEC31BQ9NQW1 1179 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 SLC12A6Q9UHW9 1150 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ATP6V1B2P21281 511 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 HPCAP84074 193 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 UBAP2LQ14157 1087 aaKnown RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 TTC7BQ86TV6 843 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 POU5F2Q8N7G0 328 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 PSMA8Q8TAA3 256 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 PIWIL2Q8TC59 973 aaKnown RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 FAM149B1Q96BN6 582 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 TLCD1Q96CP7 247 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 DYNLL2Q96FJ2 89 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 CORO1BQ9BR76 489 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 DHX36Q9H2U1 1008 aaKnown RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 CEP250Q9BV73 2442 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 M0QYV0 167 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 NR5A2O00482 541 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 TRDMT1O14717 391 aaKnown RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 SNPHO15079 494 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 MAGEB2O15479 319 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 MYBP10242 640 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 MTMR1Q13613 665 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 DUOXA2Q1HG44 320 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 EFHC2Q5JST6 749 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 OR6B2Q6IFH4 312 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms