RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 SERPINB12Q96P63 405 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 SLITRK1Q96PX8 696 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 YME1L1Q96TA2 773 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 NCAPGQ9BPX3 1015 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 FOXP3Q9BZS1 431 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 ABI2Q9NYB9 513 aaPredicted RBP13.16□□□□□ -0.3
PTPN6-201ENST00000318974 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTPN6-201ENST00000318974 PCDHB5Q9Y5E4 795 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 COL4A6Q14031 1691 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 SMIM23A6NLE4 172 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 TBC1D4O60343 1298 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 DAB1O75553 588 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 KRT1P04264 644 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 KRT7P08729 469 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 CPB1P15086 417 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 CYP2F1P24903 491 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 ATP5DP30049 168 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 MIPP30301 263 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 CHKAP35790 457 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 GRIK1P39086 918 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 PTPN9P43378 593 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 ATP11AP98196 1134 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 CDO1Q16878 200 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 ATP13A4Q4VNC1 1196 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 UBAP2Q5T6F2 1119 aaKnown RBP13.16□□□□□ -0.3
PTPN6-201ENST00000318974 RELL1Q8IUW5 271 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 RNF168Q8IYW5 571 aaPredicted RBP13.16□□□□□ -0.3
PTPN6-201ENST00000318974 SLC39A11Q8N1S5 342 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 NDRG1Q92597 394 aaKnown RBP13.16□□□□□ -0.3
PTPN6-201ENST00000318974 DDX23Q9BUQ8 820 aaKnown RBP13.16□□□□□ -0.3
PTPN6-201ENST00000318974 ADAM7Q9H2U9 754 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 USP18Q9UMW8 372 aa13.16□□□□□ -0.3
PTPN6-201ENST00000318974 MRPL42Q9Y6G3 142 aaKnown RBP13.16□□□□□ -0.3
PTPN6-201ENST00000318974 CPP00450 1065 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 CHN1P15882 459 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 ARPP19P56211 112 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 YWHAZP63104 245 aaKnown RBP13.15□□□□□ -0.3
PTPN6-201ENST00000318974 IFI35P80217 286 aaPredicted RBP13.15□□□□□ -0.3
PTPN6-201ENST00000318974 TRIP13Q15645 432 aaPredicted RBP13.15□□□□□ -0.3
PTPN6-201ENST00000318974 SH3PXD2AQ5TCZ1 1133 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 TXNRD3NBQ6F5E7 133 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 PSRC1Q6PGN9 363 aaPredicted RBP13.15□□□□□ -0.3
PTPN6-201ENST00000318974 C6orf89Q6UWU4 347 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 VSTM1Q6UX27 236 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 DEFB106AQ8N104 65 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 OTUD6BQ8N6M0 293 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 UHMK1Q8TAS1 419 aaKnown RBP13.15□□□□□ -0.3
PTPN6-201ENST00000318974 MDM1Q8TC05 714 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 FAM172AQ8WUF8 416 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 CHMP6Q96FZ7 201 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 TMEM169Q96HH4 297 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 SELENOSQ9BQE4 189 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 ZWILCHQ9H900 591 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 NGRNQ9NPE2 291 aaKnown RBP13.15□□□□□ -0.3
PTPN6-201ENST00000318974 PCSK1NQ9UHG2 260 aa13.15□□□□□ -0.3
PTPN6-201ENST00000318974 LIASO43766 372 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 TCEA3O75764 348 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 ACSL3O95573 720 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 TRUB2O95900 331 aaKnown RBP13.15□□□□□ -0.31
PTPN6-201ENST00000318974 ZBED1O96006 694 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 USP17L7P0C7H9 530 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 KLRC2P26717 231 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 IL1R2P27930 398 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 NOS2P35228 1153 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 MATKP42679 507 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 SMARCB1Q12824 385 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 GPR17Q13304 367 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 TMEM240Q5SV17 173 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 PRSS55Q6UWB4 352 aaPredicted RBP13.15□□□□□ -0.31
PTPN6-201ENST00000318974 ANKS1BQ7Z6G8 1248 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 SCN4BQ8IWT1 228 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 SCML4Q8N228 414 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 COLGALT1Q8NBJ5 622 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 IRGQQ8WZA9 623 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 PGLYRP2Q96PD5 576 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 CCDC134Q9H6E4 229 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 POPDC2Q9HBU9 364 aa13.15□□□□□ -0.31
PTPN6-201ENST00000318974 GJB5O95377 273 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 SOD2P04179 222 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 MAGEA11P43364 429 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 SLCO1A2P46721 670 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 PM20D1Q6GTS8 502 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 KIAA1841Q6NSI8 718 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 MFSD7Q6UXD7 560 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 RSPO2Q6UXX9 243 aaPredicted RBP13.14□□□□□ -0.31
PTPN6-201ENST00000318974 SPOCD1Q6ZMY3 1216 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 GSTA5Q7RTV2 222 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 SPPL2BQ8TCT7 592 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 ATXN2LQ8WWM7 1075 aaKnown RBP13.14□□□□□ -0.31
PTPN6-201ENST00000318974 C8orf48Q96LL4 319 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 C11orf84Q9BUA3 381 aaPredicted RBP13.14□□□□□ -0.31
PTPN6-201ENST00000318974 VN1R3Q9BXE9 311 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 KLHL11Q9NVR0 708 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 SPG21Q9NZD8 308 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 MTRRQ9UBK8 725 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 STAP1Q9ULZ2 295 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 USP3Q9Y6I4 520 aa13.14□□□□□ -0.31
PTPN6-201ENST00000318974 YJEFN3A6XGL0 299 aa13.13□□□□□ -0.31
PTPN6-201ENST00000318974 E7ENQ6 273 aa13.13□□□□□ -0.31
PTPN6-201ENST00000318974 PI4K2BG5E9Z4 385 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms