RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 RBBP8Q99708 897 aa14.28□□□□□ -0.12
EDEM3-201ENST00000318130 SPATA16Q9BXB7 569 aa14.28□□□□□ -0.12
EDEM3-201ENST00000318130 RHBGQ9H310 441 aa14.28□□□□□ -0.12
EDEM3-201ENST00000318130 RIC8BQ9NVN3 520 aa14.28□□□□□ -0.12
EDEM3-201ENST00000318130 EIF3DO15371 548 aaKnown RBP eCLIP14.28□□□□□ -0.12
EDEM3-201ENST00000318130 TNNI3P19429 210 aa14.28□□□□□ -0.12
EDEM3-201ENST00000318130 PDK1Q15118 436 aa14.28□□□□□ -0.12
EDEM3-201ENST00000318130 RABL6Q3YEC7 729 aaPredicted RBP14.28□□□□□ -0.12
EDEM3-201ENST00000318130 TRIM69Q86WT6 500 aa14.28□□□□□ -0.12
EDEM3-201ENST00000318130 CLIP3Q96DZ5 547 aa14.28□□□□□ -0.12
EDEM3-201ENST00000318130 MKNK1Q9BUB5 465 aa14.28□□□□□ -0.12
EDEM3-201ENST00000318130 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.28□□□□□ -0.12
EDEM3-201ENST00000318130 WHRNQ9P202 907 aa14.28□□□□□ -0.12
EDEM3-201ENST00000318130 SLC16A1P53985 500 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 TLR8Q9NR97 1041 aaKnown RBP14.27□□□□□ -0.12
EDEM3-201ENST00000318130 CYTH3O43739 400 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 RAB14P61106 215 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 DDR1Q08345 913 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 ACAD10Q6JQN1 1059 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 RBM43Q6ZSC3 357 aaKnown RBP14.27□□□□□ -0.12
EDEM3-201ENST00000318130 PAFAH2Q99487 392 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 N6AMT1Q9Y5N5 214 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 F8VZ95 297 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 PON1P27169 355 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 ALDH5A1P51649 535 aaPredicted RBP14.27□□□□□ -0.12
EDEM3-201ENST00000318130 STILQ15468 1287 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 KBTBD12Q3ZCT8 623 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 HDDC2Q7Z4H3 204 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 ATP8B4Q8TF62 1192 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 ZDHHC6Q9H6R6 413 aa14.27□□□□□ -0.12
EDEM3-201ENST00000318130 DDX18Q9NVP1 670 aaKnown RBP14.27□□□□□ -0.12
EDEM3-201ENST00000318130 CLASP2O75122 1294 aaKnown RBP14.27□□□□□ -0.13
EDEM3-201ENST00000318130 RHOCP08134 193 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 PYGMP11217 842 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 PTGER2P43116 358 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 ALDH6A1Q02252 535 aaKnown RBP14.27□□□□□ -0.13
EDEM3-201ENST00000318130 SNX30Q5VWJ9 437 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 CENPPQ6IPU0 288 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 BBS7Q8IWZ6 715 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 TMC2Q8TDI7 906 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 OMDQ99983 421 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 TBX3O15119 743 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 GSNP06396 782 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 ARHGAP22Q7Z5H3 698 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 HES6Q96HZ4 224 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 RSPH9Q9H1X1 276 aaPredicted RBP14.27□□□□□ -0.13
EDEM3-201ENST00000318130 AGO4Q9HCK5 861 aaKnown RBP14.27□□□□□ -0.13
EDEM3-201ENST00000318130 PRDM4Q9UKN5 801 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 FKBP6O75344 327 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 TNIP2Q8NFZ5 429 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 CALML6Q8TD86 181 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 TMEM237Q96Q45 408 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 THUMPD3Q9BV44 507 aaKnown RBP14.27□□□□□ -0.13
EDEM3-201ENST00000318130 RTFDC1Q9BY42 306 aaPredicted RBP14.27□□□□□ -0.13
EDEM3-201ENST00000318130 H2AFY2Q9P0M6 372 aaPredicted RBP14.27□□□□□ -0.13
EDEM3-201ENST00000318130 PCDHB9Q9Y5E1 797 aa14.27□□□□□ -0.13
EDEM3-201ENST00000318130 SGPL1O95470 568 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 WASP42768 502 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 TMC5Q6UXY8 1006 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 LPCAT2Q7L5N7 544 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 CHMP1BQ7LBR1 199 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 BNIPLQ7Z465 357 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 ZNF677Q86XU0 584 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 PRCCQ92733 491 aaPredicted RBP14.26□□□□□ -0.13
EDEM3-201ENST00000318130 ADGRA3Q8IWK6 1321 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 ZSCAN5CA6NGD5 496 aaPredicted RBP14.26□□□□□ -0.13
EDEM3-201ENST00000318130 E9PBE3 544 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 KLHL41O60662 606 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 GUCA1CO95843 209 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 PGM5Q15124 567 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 HERC6Q8IVU3 1022 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 TSEN34Q9BSV6 310 aaKnown RBP14.26□□□□□ -0.13
EDEM3-201ENST00000318130 CNGB3Q9NQW8 809 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 TMEM51Q9NW97 253 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 KCND2Q9NZV8 630 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 DIP2CQ9Y2E4 1556 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 MED24O75448 989 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 SFSWAPQ12872 951 aaKnown RBP14.26□□□□□ -0.13
EDEM3-201ENST00000318130 WASHC2DQ5SRD0 308 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 PLA2G12BQ9BX93 195 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 ZC3H13Q5T200 1668 aaKnown RBP14.26□□□□□ -0.13
EDEM3-201ENST00000318130 FOXN3O00409 490 aaPredicted RBP14.26□□□□□ -0.13
EDEM3-201ENST00000318130 PSTPIP1O43586 416 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 GJB1P08034 283 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 MAPRE1Q15691 268 aaKnown RBP14.26□□□□□ -0.13
EDEM3-201ENST00000318130 TRMT11Q7Z4G4 463 aaKnown RBP14.26□□□□□ -0.13
EDEM3-201ENST00000318130 SOCS4Q8WXH5 440 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 HES2Q9Y543 173 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 IGSF9BQ9UPX0 1349 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 TSC22D2O75157 780 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 DSG3P32926 999 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 SARSP49591 514 aaKnown RBP14.26□□□□□ -0.13
EDEM3-201ENST00000318130 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
EDEM3-201ENST00000318130 SLC34A1Q06495 639 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 TRIM65Q6PJ69 517 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.26□□□□□ -0.13
EDEM3-201ENST00000318130 SEMA4AQ9H3S1 761 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 NT5MQ9NPB1 228 aa14.26□□□□□ -0.13
EDEM3-201ENST00000318130 FAM58BPP0C7Q3 252 aa14.25□□□□□ -0.13
EDEM3-201ENST00000318130 CDC25CP30307 473 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms