RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 DRD4P21917 467 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 AVPR1AP37288 418 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 GLRBP48167 497 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 PURAQ00577 322 aaKnown RBP13.52□□□□□ -0.25
SNED1-201ENST00000310397 SLC35C1Q96A29 364 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 KRT84Q9NSB2 600 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 TRIP4Q15650 581 aaPredicted RBP13.52□□□□□ -0.25
SNED1-201ENST00000310397 ZRANB3Q5FWF4 1079 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 DHFR2Q86XF0 187 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 ASB2Q96Q27 587 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 GPRC5CQ9NQ84 441 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 WWOXQ9NZC7 414 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 C2CD2Q9Y426 696 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 C1orf232A0A0U1RR37 186 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 TFRCP02786 760 aaKnown RBP13.52□□□□□ -0.25
SNED1-201ENST00000310397 RPA3P35244 121 aaPredicted RBP13.52□□□□□ -0.25
SNED1-201ENST00000310397 CHN2P52757 468 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 GALNTL6Q49A17 601 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 C2CD6Q53TS8 623 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 PRR5LQ6MZQ0 368 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 MPZL3Q6UWV2 235 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 TMEM176AQ96HP8 235 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 INTS13Q9NVM9 706 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 CROTQ9UKG9 612 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 CHD4Q14839 1912 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 ATP6V1B2P21281 511 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 DNAJB2P25686 324 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 RRM2P31350 389 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 RPL10AP62906 217 aaKnown RBP13.52□□□□□ -0.25
SNED1-201ENST00000310397 GTF2H3Q13889 308 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 SGO1Q5FBB7 561 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 ZCCHC7Q8N3Z6 543 aaKnown RBP13.52□□□□□ -0.25
SNED1-201ENST00000310397 ZNF606Q8WXB4 792 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 RXFP2Q8WXD0 754 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 POP1Q99575 1024 aaKnown RBP13.52□□□□□ -0.25
SNED1-201ENST00000310397 ZNRF3Q9ULT6 936 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNED1-201ENST00000310397 C15orf38-AP3S2A0A0A6YYH1 394 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 IMPDH2P12268 514 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 EIF2B2P49770 351 aaKnown RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 OTOAQ7RTW8 1153 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 ARPINQ7Z6K5 226 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 PIWIL2Q8TC59 973 aaKnown RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 FAM210AQ96ND0 272 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 IARS2Q9NSE4 1012 aaKnown RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 ARMCX1Q9P291 453 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 COMMD3-BMI1R4GMX3 469 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 WFS1O76024 890 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 CYP2F1P24903 491 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 ZNF268Q14587 947 aaPredicted RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNED1-201ENST00000310397 PRCCQ92733 491 aaPredicted RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 ZFYVE19Q96K21 471 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 PRDM16Q9HAZ2 1276 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 DIABLOQ9NR28 239 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 DNPEPQ9ULA0 475 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 POLIQ9UNA4 740 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 DCXO43602 365 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 VPS4BO75351 444 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 FBXO21O94952 628 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 LDLRP01130 860 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 PROCP04070 461 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 BMP6P22004 513 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 PPP3CCP48454 512 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 PTPN11Q06124 597 aaPredicted RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 CACNB2Q08289 660 aaPredicted RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 PALB2Q86YC2 1186 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 CCDC33Q8N5R6 958 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 SETD9Q8NE22 299 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 LSM7Q9UK45 103 aaKnown RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 CCDC88AQ3V6T2 1871 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 AFF2P51816 1311 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 FRMPD4Q14CM0 1322 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 APOC4-APOC2K7ER74 178 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 ZNF862O60290 1169 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 APOC2P02655 101 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 CYP2C9P11712 490 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 HARS2P49590 506 aaKnown RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 FASTKQ14296 549 aaKnown RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 RORBQ92753 470 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 CEP44Q9C0F1 390 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 C6orf203Q9P0P8 240 aaPredicted RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 BAZ2AQ9UIF9 1905 aaKnown RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 KBTBD13C9JR72 458 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 ASNA1O43681 348 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 TSHRP16473 764 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 ANXA11P50995 505 aaKnown RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 ARHGEF7Q14155 803 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 NSMCE2Q96MF7 247 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 PPP1R10Q96QC0 940 aaKnown RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 LRRC19Q9H756 370 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 TRPC7Q9HCX4 862 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 CLOCKO15516 846 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 TADA2AO75478 443 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 AMPD2Q01433 879 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 FRG1Q14331 258 aaKnown RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 DDR2Q16832 855 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 PARP6Q2NL67 630 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 TMC5Q6UXY8 1006 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 COLGALT1Q8NBJ5 622 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms