RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 CHRNA5P30532 468 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 AP1S2P56377 157 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 MTF1Q14872 753 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 NAB2Q15742 525 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 CTXN3Q4LDR2 81 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 ZNF677Q86XU0 584 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 SUGP1Q8IWZ8 645 aaKnown RBP13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 CHP1Q99653 195 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 UBE2OQ9C0C9 1292 aaKnown RBP13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 OR10H2O60403 315 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 MFN2O95140 757 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 COPZ1P61923 177 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 DSELQ8IZU8 1212 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 FAM136AQ96C01 138 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 OMA1Q96E52 524 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 CHORDC1Q9UHD1 332 aaPredicted RBP13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 SNX13Q9Y5W8 968 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 RPL10AP62906 217 aaKnown RBP13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 NFYCQ13952 458 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 ATP6AP1LQ52LC2 224 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 DENND5BQ6ZUT9 1274 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 WDR24Q96S15 920 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 SMNDC1O75940 238 aaKnown RBP eCLIP13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 COMTP21964 271 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 CCNIQ14094 377 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 ADRM1Q16186 407 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 TRIM63Q969Q1 353 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 GGA3Q9NZ52 723 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 ENTPD4Q9Y227 616 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 ATMINO43313 823 aaPredicted RBP13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 CLK2P49760 499 aaKnown RBP13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 TSNQ15631 228 aaKnown RBP13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 SNAP47Q5SQN1 464 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 ARMC3Q5W041 872 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 BARGINQ6ZT62 677 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 CDH24Q86UP0 819 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 ARID3BQ8IVW6 561 aaPredicted RBP13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 RMND5BQ96G75 393 aaPredicted RBP13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 KCTD14Q9BQ13 255 aaPredicted RBP13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 DPY30Q9C005 99 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 PIF1Q9H611 641 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 POLR1BQ9H9Y6 1135 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 MBD2Q9UBB5 411 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 TRIM10Q9UDY6 481 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 IGSF9BQ9UPX0 1349 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 CRYL1Q9Y2S2 319 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 RPS6KL1Q9Y6S9 549 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 PNPLA4P41247 253 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 MCEMP1Q8IX19 187 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 TPD52L3Q96J77 140 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 ZCCHC2Q9C0B9 1178 aaKnown RBP13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 ROGDIQ9GZN7 287 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 SPG21Q9NZD8 308 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 ZNF232Q9UNY5 417 aa13.21□□□□□ -0.29
SPTBN2-201ENST00000309996 SF3B1O75533 1304 aaKnown RBP eCLIP13.21□□□□□ -0.33e-6■■■■■ 137.9
SPTBN2-201ENST00000309996 TBC1D3BA6NDS4 549 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 SLC25A27O95847 323 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 CSF1RP07333 972 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 RHOCP08134 193 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 GEMP55040 296 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 GRIK3Q13003 919 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 SEL1L3Q68CR1 1132 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 OR2W6PQ8NHA6 318 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 RACGAP1Q9H0H5 632 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 COMMD8Q9NX08 183 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 COL15A1P39059 1388 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 DNAJC3Q13217 504 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 ATP13A4Q4VNC1 1196 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 JAMLQ86YT9 394 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 SRBD1Q8N5C6 995 aaKnown RBP13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 RERGQ96A58 199 aaPredicted RBP13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 KLHL4Q9C0H6 718 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 TLR8Q9NR97 1041 aaKnown RBP13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 RAD51CO43502 376 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 PLA2G6O60733 806 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 PARNO95453 639 aaKnown RBP13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 OXCT1P55809 520 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 RASGEF1AQ8N9B8 481 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 ZNF248Q8NDW4 579 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 HIC2Q96JB3 615 aa13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 FRMD8Q9BZ67 464 aaPredicted RBP13.21□□□□□ -0.3
SPTBN2-201ENST00000309996 FLT1P17948 1338 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 A0A087WZ62 844 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 M0QYT0 321 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 RBP3P10745 1247 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 CYP2A7P20853 494 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 PURAQ00577 322 aaKnown RBP13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 ZNF57Q68EA5 555 aaPredicted RBP13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 COL26A1Q96A83 441 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 PPP1R10Q96QC0 940 aaKnown RBP13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 SLC26A4O43511 780 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 GLRA3O75311 464 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 HLA-DRAP01903 254 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 PRKCEQ02156 737 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 UTP15Q8TED0 518 aaKnown RBP13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 LPAR1Q92633 364 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 FAM111AQ96PZ2 611 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 CGRRF1Q99675 332 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 ZNRF3Q9ULT6 936 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms