RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 PPP1R16BQ96T49 567 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 EFCAB1Q9HAE3 211 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 CXorf21Q9HAI6 301 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 CLK4Q9HAZ1 481 aaKnown RBP11.18□□□□□ -0.62
GGA2-201ENST00000309859 GPRC5CQ9NQ84 441 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 COQ3Q9NZJ6 369 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 USP31Q70CQ4 1352 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 PFDN6O15212 129 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 IST1P53990 364 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 NRLP54845 237 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 SMU1Q2TAY7 513 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 CHST15Q7LFX5 561 aaPredicted RBP11.18□□□□□ -0.62
GGA2-201ENST00000309859 RNF34Q969K3 372 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 RPAP3Q9H6T3 665 aaPredicted RBP11.18□□□□□ -0.62
GGA2-201ENST00000309859 GPATCH2LQ9NWQ4 482 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 TMED5Q9Y3A6 229 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 NCANO14594 1321 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 SPATA31A3Q5VYP0 1347 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 STX16-NPEPL1H3BU86 382 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 PRPF4O43172 522 aaKnown RBP eCLIP11.18□□□□□ -0.622e-7■■□□□ 12.6
GGA2-201ENST00000309859 CLIC3O95833 236 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 GRK2P25098 689 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 GRIA3P42263 894 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 HAUS6Q7Z4H7 955 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 CLIP4Q8N3C7 705 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 TAS1R2Q8TE23 839 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 UBASH3BQ8TF42 649 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 MIR1-1HGQ9H1L0 117 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 GPAMQ9HCL2 828 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 SEPT9Q9UHD8 586 aaPredicted RBP11.18□□□□□ -0.62
GGA2-201ENST00000309859 IPPQ9Y573 584 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 ZNF804BA4D1E1 1349 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 SERPINA6P08185 405 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 F7P08709 466 aaPredicted RBP11.18□□□□□ -0.62
GGA2-201ENST00000309859 YWHAHQ04917 246 aaPredicted RBP11.18□□□□□ -0.62
GGA2-201ENST00000309859 DPY19L2Q6NUT2 758 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 SPOCD1Q6ZMY3 1216 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 MBOAT7Q96N66 472 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 TMEM109Q9BVC6 243 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 PRRG3Q9BZD7 231 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 FAM96AQ9H5X1 160 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 PTPRUQ92729 1446 aa11.18□□□□□ -0.62
GGA2-201ENST00000309859 KRT7P08729 469 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 S100A5P33763 92 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 RCVRNP35243 200 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 RELAQ04206 551 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 MOGSQ13724 837 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 NPY5RQ15761 445 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 AGKQ53H12 422 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 TJAP1Q5JTD0 557 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 NEK5Q6P3R8 708 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 SNX29P2Q8IUI4 249 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 CYP2W1Q8TAV3 490 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 USP33Q8TEY7 942 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 NSMCE3Q96MG7 304 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 C1orf50Q9BV19 199 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 COQ10BQ9H8M1 238 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 ENTPD7Q9NQZ7 604 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 CDY2AQ9Y6F7 541 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 CDY1Q9Y6F8 540 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 ADAMTS13Q76LX8 1427 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 A8MV72 311 aaPredicted RBP11.17□□□□□ -0.62
GGA2-201ENST00000309859 UBAP1LF5GYI3 381 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 CRABP2P29373 138 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 MAP3K10Q02779 954 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 CTC1Q2NKJ3 1217 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 ANKRD22Q5VYY1 191 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 CDH24Q86UP0 819 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 GLIS1Q8NBF1 620 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 PIWIL2Q8TC59 973 aaKnown RBP11.17□□□□□ -0.62
GGA2-201ENST00000309859 ATP6V1E2Q96A05 226 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 CEP170P1Q96L14 293 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 GLT8D2Q9H1C3 349 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 GPRC5DQ9NZD1 345 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 PSMD13Q9UNM6 376 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 FADS3Q9Y5Q0 445 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 SNPHO15079 494 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 KCNA2P16389 499 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 SNX16P57768 344 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 PLEKHG4Q58EX7 1191 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 NPNTQ6UXI9 565 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 ARHGAP27Q6ZUM4 889 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 ERI1Q8IV48 349 aaKnown RBP11.17□□□□□ -0.62
GGA2-201ENST00000309859 FEZF2Q8TBJ5 459 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 ZNF398Q8TD17 642 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 CELF1Q92879 486 aaKnown RBP11.17□□□□□ -0.62
GGA2-201ENST00000309859 FAM136AQ96C01 138 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 DHRS1Q96LJ7 313 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 ITM2CQ9NQX7 267 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 SLC39A10Q9ULF5 831 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 FRMPD4Q14CM0 1322 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.17□□□□□ -0.62
GGA2-201ENST00000309859 PPM1LQ5SGD2 360 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 C12orf43Q96C57 262 aaKnown RBP11.17□□□□□ -0.62
GGA2-201ENST00000309859 FAM84BQ96KN1 310 aaPredicted RBP11.17□□□□□ -0.62
GGA2-201ENST00000309859 CCDC28BQ9BUN5 200 aa11.17□□□□□ -0.62
GGA2-201ENST00000309859 ARHGEF28Q8N1W1 1705 aaKnown RBP11.17□□□□□ -0.62
GGA2-201ENST00000309859 F8VP50 259 aa11.16□□□□□ -0.62
GGA2-201ENST00000309859 H0Y858 1186 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms