RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 NSL1Q96IY1 281 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 GBP5Q96PP8 586 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 FAM118BQ9BPY3 351 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 DHRS4Q9BTZ2 278 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 YIPF2Q9BWQ6 316 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 CREBZFQ9NS37 354 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 NMRK1Q9NWW6 199 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 H0Y3Z8 333 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 PPEF2O14830 753 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 GSC2O15499 205 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 TJP3O95049 919 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 TGDSO95455 350 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 PDHA1P08559 390 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 ARSEP51690 589 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 LSAMPQ13449 338 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 TMEM132DQ14C87 1099 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 FASTKD3Q14CZ7 662 aaKnown RBP10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 SURF1Q15526 300 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 PLEKHG4Q58EX7 1191 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 LRRC38Q5VT99 294 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 FAM91A1Q658Y4 838 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 ADGRD1Q6QNK2 874 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 PCGF5Q86SE9 256 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 MTG1Q9BT17 334 aaPredicted RBP10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 KATNAL1Q9BW62 490 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 SMYD3Q9H7B4 428 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 SPC25Q9HBM1 224 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 NPHS2Q9NP85 383 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 DNPEPQ9ULA0 475 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 ZNF148Q9UQR1 794 aa10.71□□□□□ -0.69
APOBEC3F-201ENST00000308521 ANK1P16157 1881 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 HAUS5O94927 633 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 PHBP35232 272 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 ASPAP45381 313 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 SLC34A1Q06495 639 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 GPS1Q13098 491 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 CCDC6Q16204 474 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 SLC27A1Q6PCB7 646 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 NKD2Q969F2 451 aaPredicted RBP10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 SLC35B4Q969S0 331 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 SLITRK1Q96PX8 696 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 NR1H4Q96RI1 486 aaPredicted RBP10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 NIF3L1Q9GZT8 377 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 SDCBP2Q9H190 292 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 PCDH9Q9HC56 1237 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 HMGXB4Q9UGU5 601 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 IP6K2Q9UHH9 426 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 RABGEF1Q9UJ41 708 aa10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 MTO1Q9Y2Z2 717 aaKnown RBP10.71□□□□□ -0.7
APOBEC3F-201ENST00000308521 MEIS3P2A8K0S8 358 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 ADAMTS4O75173 837 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 IL18RAPO95256 599 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 IL1BP01584 269 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 ITGAVP06756 1048 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 TSHRP16473 764 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 KRT4P19013 534 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 TBXAS1P24557 533 aaPredicted RBP10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 APLP1P51693 650 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 AP3M2P53677 418 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 VCPP55072 806 aaKnown RBP10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 NOMO3P69849 1222 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 IRF5Q13568 498 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 OASLQ15646 514 aaKnown RBP10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 RNF220Q5VTB9 566 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 SNX30Q5VWJ9 437 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 DAB2IPQ5VWQ8 1189 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 NOTUMQ6P988 496 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 RFWD3Q6PCD5 774 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZBED8Q8IZ13 594 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 GLIS1Q8NBF1 620 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 FEZF2Q8TBJ5 459 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 MZB1Q8WU39 189 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZNF606Q8WXB4 792 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 TFAP2BQ92481 460 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 OLFM3Q96PB7 478 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 TRIM55Q9BYV6 548 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 SYNCQ9H7C4 482 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 DPP3Q9NY33 737 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 SPATA7Q9P0W8 599 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 TUBGCP4Q9UGJ1 667 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 GTF2IRD1Q9UHL9 959 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 BIRC5O15392 142 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 RECQL4O94761 1208 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 PSMG1O95456 288 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 GPX6P59796 221 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 AP1B1Q10567 949 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 PDIA2Q13087 525 aaKnown RBP10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 SEPT7Q16181 437 aaKnown RBP10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 KLHL38Q2WGJ6 581 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZNF667Q5HYK9 610 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 BANPQ8N9N5 519 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZNF784Q8NCA9 323 aaPredicted RBP10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 RFWD2Q8NHY2 731 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 CXorf38Q8TB03 319 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 RAET1EQ8TD07 263 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 SKA1Q96BD8 255 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 TWNKQ96RR1 684 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 C11orf70Q9BRQ4 267 aa10.7□□□□□ -0.7
APOBEC3F-201ENST00000308521 MANSC1Q9H8J5 431 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms