RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ABCG1P45844 678 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 MPP3Q13368 585 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 NAPEPLDQ6IQ20 393 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 PDCD6IPQ8WUM4 868 aaKnown RBP13.69□□□□□ -0.22
DDX54-201ENST00000306014 APBB2Q92870 758 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 DDIT4Q9NX09 232 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 IL1RAPL1Q9NZN1 696 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 RUVBL2Q9Y230 463 aaKnown RBP13.69□□□□□ -0.22
DDX54-201ENST00000306014 MYH15Q9Y2K3 1946 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
DDX54-201ENST00000306014 SNX2O60749 519 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 WFS1O76024 890 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 DDNO94850 711 aaPredicted RBP13.68□□□□□ -0.22
DDX54-201ENST00000306014 MLH1P40692 756 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 MMP14P50281 582 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 UBAP2LQ14157 1087 aaKnown RBP13.68□□□□□ -0.22
DDX54-201ENST00000306014 FBXO16Q8IX29 292 aaPredicted RBP13.68□□□□□ -0.22
DDX54-201ENST00000306014 CYGBQ8WWM9 190 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 HTR3CQ8WXA8 447 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 SP110Q9HB58 689 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 FZD1Q9UP38 647 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 SNX13Q9Y5W8 968 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 RGPD5Q99666 1765 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 GOLGA8CPA6NN73 597 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 TRDMT1O14717 391 aaKnown RBP13.68□□□□□ -0.22
DDX54-201ENST00000306014 TIMM44O43615 452 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 USP12O75317 370 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 ZMPSTE24O75844 475 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 ADSSP30520 456 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 PLOD1Q02809 727 aaPredicted RBP13.68□□□□□ -0.22
DDX54-201ENST00000306014 ACVR2BQ13705 512 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 BTBD8Q5XKL5 378 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 METTL7BQ6UX53 244 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 EFCAB3Q8N7B9 438 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 GCNAQ96QF7 691 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 MMADHCQ9H3L0 296 aaPredicted RBP13.68□□□□□ -0.22
DDX54-201ENST00000306014 CYP4F12Q9HCS2 524 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 CHST12Q9NRB3 414 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 COL20A1Q9P218 1284 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 AP1G2O75843 785 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 GP5P40197 560 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 INPP5AQ14642 412 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.68□□□□□ -0.22
DDX54-201ENST00000306014 TBCBQ99426 244 aa13.68□□□□□ -0.22
DDX54-201ENST00000306014 LACTBL1A8MY62 500 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 CHADO15335 359 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 SRP72O76094 671 aaKnown RBP13.67□□□□□ -0.22
DDX54-201ENST00000306014 ASMTLO95671 621 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 MT-CO1P00395 513 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 ASS1P00966 412 aaKnown RBP13.67□□□□□ -0.22
DDX54-201ENST00000306014 FKBP1AP62942 108 aaKnown RBP13.67□□□□□ -0.22
DDX54-201ENST00000306014 ZBTB41Q5SVQ8 909 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 ANKRD22Q5VYY1 191 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 KYQ8NBH2 561 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 PABPC5Q96DU9 382 aaKnown RBP13.67□□□□□ -0.22
DDX54-201ENST00000306014 NDUFA13Q9P0J0 144 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 TTC36A6NLP5 189 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 AP3B1O00203 1094 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 ACKR2O00590 384 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 FAM155BO75949 473 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 TPH1P17752 444 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 FNBP1LQ5T0N5 605 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 WLSQ5T9L3 541 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 PCYOX1LQ8NBM8 494 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 GIPC2Q8TF65 315 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 SNRNP27Q8WVK2 155 aaKnown RBP13.67□□□□□ -0.22
DDX54-201ENST00000306014 CPT1BQ92523 772 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 CATSPER2Q96P56 530 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 ADARB2Q9NS39 739 aaKnown RBP13.67□□□□□ -0.22
DDX54-201ENST00000306014 A0A096LPK6 155 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 GOLGA8TH3BQL2 631 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 CD4P01730 458 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 APOA4P06727 396 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 ANPEPP15144 967 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 HIRAP54198 1017 aaPredicted RBP13.67□□□□□ -0.22
DDX54-201ENST00000306014 KIZQ2M2Z5 673 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 KHDC1Q4VXA5 237 aaKnown RBP13.67□□□□□ -0.22
DDX54-201ENST00000306014 USP6NLQ92738 828 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 NRDE2Q9H7Z3 1164 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 V9GYQ6 96 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 TPP1O14773 563 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 PSMC3P17980 439 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 STX5Q13190 355 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 CAPSQ13938 189 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 PTK2BQ14289 1009 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 ACAP1Q15027 740 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 PTPN20Q4JDL3 420 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 KYAT3Q6YP21 454 aaKnown RBP13.67□□□□□ -0.22
DDX54-201ENST00000306014 FASTKD5Q7L8L6 764 aaKnown RBP13.67□□□□□ -0.22
DDX54-201ENST00000306014 WNK4Q96J92 1243 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 PHACTR1Q9C0D0 580 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 VANGL2Q9ULK5 521 aa13.67□□□□□ -0.22
DDX54-201ENST00000306014 PRR5-ARHGAP8B1AHC4 643 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 TRIM13O60858 407 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 TRUB2O95900 331 aaKnown RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 CST3P01034 146 aaPredicted RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 JCHAINP01591 159 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 ERVK-10P10266 1014 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 ATICP31939 592 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 HDAC4P56524 1084 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms