RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 FMNL3Q8IVF7 1028 aa27.65■■■□□ 2.02
CDKN2A-201ENST00000304494 ALLCQ8N6M5 410 aa27.65■■■□□ 2.02
CDKN2A-201ENST00000304494 IL17RCQ8NAC3 791 aa27.65■■■□□ 2.02
CDKN2A-201ENST00000304494 TUBGCP2Q9BSJ2 902 aa27.65■■■□□ 2.02
CDKN2A-201ENST00000304494 NDST4Q9H3R1 872 aa27.65■■■□□ 2.02
CDKN2A-201ENST00000304494 AGO1Q9UL18 857 aaKnown RBP27.65■■■□□ 2.02
CDKN2A-201ENST00000304494 PTPRZ1P23471 2315 aaPredicted RBP27.65■■■□□ 2.02
CDKN2A-201ENST00000304494 PIK3R2O00459 728 aa27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 LETM1O95202 739 aaPredicted RBP27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 KLF8O95600 359 aaPredicted RBP27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 RETP07949 1114 aa27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 GPD2P43304 727 aa27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 ACADSBP45954 432 aa27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 HARS2P49590 506 aaKnown RBP27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 TRIP4Q15650 581 aaPredicted RBP27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 CRY1Q16526 586 aa27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 VWA3BQ502W6 1294 aa27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 C10orf76Q5T2E6 689 aa27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 CACNA2D4Q7Z3S7 1137 aa27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 DENND1CQ8IV53 801 aa27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 TXNDC5Q8NBS9 432 aaKnown RBP27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 GPT2Q8TD30 523 aa27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 ZNF606Q8WXB4 792 aa27.64■■■□□ 2.02
CDKN2A-201ENST00000304494 ATG2BQ96BY7 2078 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 MYOFQ9NZM1 2061 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 SART1O43290 800 aaKnown RBP27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 THAP12O43422 761 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 GABBR2O75899 941 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 CYBBP04839 570 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 USP8P40818 1118 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 DGKGP49619 791 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 EMC10Q5UCC4 262 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 STK32AQ8WU08 396 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 SHC3Q92529 594 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 SFMBT1Q9UHJ3 866 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 STARD13Q9Y3M8 1113 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 ZNF292O60281 2723 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 OTOGLQ3ZCN5 2332 aa27.63■■■□□ 2.01
CDKN2A-201ENST00000304494 ANTXRLA6NF34 631 aa27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 KCNJ18B7U540 433 aa27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 ALDH1A2O94788 518 aa27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 PENKP01210 267 aaPredicted RBP27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 LTFP02788 710 aa27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 CHRM1P11229 460 aaPredicted RBP27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 RPL34P49207 117 aaKnown RBP27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 KCNJ12Q14500 433 aa27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 HSP90AA4PQ58FG1 418 aa27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 MSANTD2Q6P1R3 559 aa27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 CPXM2Q8N436 756 aa27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 FAM160A2Q8N612 972 aaPredicted RBP27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 ZNF513Q8N8E2 541 aaPredicted RBP27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 BHMTQ93088 406 aa27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 MIS12Q9H081 205 aa27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 POLMQ9NP87 494 aaPredicted RBP27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 ST7Q9NRC1 585 aa27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 GVINP1Q7Z2Y8 2422 aa27.62■■■□□ 2.01
CDKN2A-201ENST00000304494 BECN2A8MW95 431 aa27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 SGK1O00141 431 aa27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 TRIM24O15164 1050 aa27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 LRP3O75074 770 aa27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 EEF1GP26641 437 aaKnown RBP27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 APBA1Q02410 837 aa27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 MIIPQ5JXC2 388 aa27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 DENND1BQ6P3S1 775 aa27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 RBM43Q6ZSC3 357 aaKnown RBP27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 RASSF3Q86WH2 238 aa27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 FAM217AQ8IXS0 508 aa27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 CLEC4CQ8WTT0 213 aa27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 TRIM62Q9BVG3 475 aa27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 PLK2Q9NYY3 685 aa27.61■■■□□ 2.01
CDKN2A-201ENST00000304494 LATS1O95835 1130 aa27.6■■■□□ 2.01
CDKN2A-201ENST00000304494 TCP11X2Q5H9J9 407 aa27.6■■■□□ 2.01
CDKN2A-201ENST00000304494 FYB2Q5VWT5 728 aa27.6■■■□□ 2.01
CDKN2A-201ENST00000304494 ANO7Q6IWH7 933 aa27.6■■■□□ 2.01
CDKN2A-201ENST00000304494 ENOX1Q8TC92 643 aaKnown RBP27.6■■■□□ 2.01
CDKN2A-201ENST00000304494 SIX2Q9NPC8 291 aa27.6■■■□□ 2.01
CDKN2A-201ENST00000304494 SAMSN1Q9NSI8 373 aaKnown RBP27.6■■■□□ 2.01
CDKN2A-201ENST00000304494 FBXO10Q9UK96 956 aa27.6■■■□□ 2.01
CDKN2A-201ENST00000304494 DNAJC12Q9UKB3 198 aa27.6■■■□□ 2.01
CDKN2A-201ENST00000304494 NFE2L3Q9Y4A8 694 aa27.6■■■□□ 2.01
CDKN2A-201ENST00000304494 EP300Q09472 2414 aaPredicted RBP27.59■■■□□ 2.01
CDKN2A-201ENST00000304494 PES1O00541 588 aaKnown RBP27.59■■■□□ 2.01
CDKN2A-201ENST00000304494 CISD3P0C7P0 127 aa27.59■■■□□ 2.01
CDKN2A-201ENST00000304494 ZNF445P59923 1031 aa27.59■■■□□ 2.01
CDKN2A-201ENST00000304494 TMEM92Q6UXU6 159 aa27.59■■■□□ 2.01
CDKN2A-201ENST00000304494 SCUBE3Q8IX30 993 aa27.59■■■□□ 2.01
CDKN2A-201ENST00000304494 LOXL4Q96JB6 756 aa27.59■■■□□ 2.01
CDKN2A-201ENST00000304494 SLC4A5Q9BY07 1137 aa27.59■■■□□ 2.01
CDKN2A-201ENST00000304494 ACP6Q9NPH0 428 aa27.59■■■□□ 2.01
CDKN2A-201ENST00000304494 USP18Q9UMW8 372 aa27.59■■■□□ 2.01
CDKN2A-201ENST00000304494 MSI1O43347 362 aaKnown RBP27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 ADAM23O75077 832 aa27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 MBD3O95983 291 aa27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 PTK2Q05397 1052 aa27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 USP39Q53GS9 565 aaKnown RBP27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 SASS6Q6UVJ0 657 aa27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 TOGARAM2Q6ZUX3 1019 aa27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 C11orf74Q86VG3 221 aa27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 DDI1Q8WTU0 396 aa27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 ZC3H10Q96K80 434 aaKnown RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms