RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 EGFRP00533 1210 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 ABHD2P08910 425 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 MMP10P09238 476 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 FDPSP14324 419 aaKnown RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 PHKG1Q16816 387 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 RNF43Q68DV7 783 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 ZCCHC8Q6NZY4 707 aaKnown RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 SPOCD1Q6ZMY3 1216 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 SNRNP27Q8WVK2 155 aaKnown RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 CLPBQ9H078 707 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 DPP3Q9NY33 737 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TRPM5Q9NZQ8 1165 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 LOC100653049A0A140TA62 436 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 AREL1O15033 823 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 SNAP91O60641 907 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TXNP10599 105 aaKnown RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 RGS7P49802 495 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 CPT1AP50416 773 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 OVGP1Q12889 678 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 POLD3Q15054 466 aaPredicted RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 GMCL1P1Q8NEA9 526 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 ZBED2Q9BTP6 218 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 MYLK2Q9H1R3 596 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 RNPEPL1Q9HAU8 725 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 NMRAL1Q9HBL8 299 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 SPASTQ9UBP0 616 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TSR3Q9UJK0 312 aaKnown RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 ITGA11Q9UKX5 1188 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 MYL12AP19105 171 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 KCNJ1P48048 391 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 PREPLQ4J6C6 727 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 CCDC33Q8N5R6 958 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 RUSC1Q9BVN2 902 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 DCLK3Q9C098 648 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 C6orf62Q9GZU0 229 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 KCNH4Q9UQ05 1017 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ICAM1P05362 532 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 CHRM3P20309 590 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ADARP55265 1226 aaKnown RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 PPIDQ08752 370 aaKnown RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ZC2HC1CQ53FD0 456 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 CASP12Q6UXS9 341 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 DDX53Q86TM3 631 aaKnown RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 C6orf203Q9P0P8 240 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 CEP170BQ9Y4F5 1589 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 AGLP35573 1532 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 BGNP21810 368 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 YY1P25490 414 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 SLC11A2P49281 568 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 CYP24A1Q07973 514 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 NAIF1Q69YI7 327 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 CDH24Q86UP0 819 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 EXOC3L1Q86VI1 746 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 YAF2Q8IY57 180 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 QKIQ96PU8 341 aaKnown RBP eCLIP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ADAM28Q9UKQ2 775 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 FAM205CA6NFA0 338 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 FAM20BO75063 409 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 NDUFB10O96000 172 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ITGA4P13612 1032 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 TRAF3Q13114 568 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 RGS21Q2M5E4 152 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 MZT2BQ6NZ67 158 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 SLC25A41Q8N5S1 370 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 SLC7A5P2Q9GIP4 190 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 KCNH7Q9NS40 1196 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 CORO1CQ9ULV4 474 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 V9GYQ6 96 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 E9PBE3 544 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 GRAP2O75791 330 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ZNF682O95780 498 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ME2P23368 584 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 SREBF1P36956 1147 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 C16orf72Q14CZ0 275 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 FUCA2Q9BTY2 467 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 WDCPQ9H6R7 721 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 AVENQ9NQS1 362 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 UBAP1Q9NZ09 502 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 UBQLN1Q9UMX0 589 aaKnown RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 SH3BP1Q9Y3L3 701 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 DAGLAQ9Y4D2 1042 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 CCDC154A6NI56 674 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 STX11O75558 287 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 NPM3O75607 178 aaKnown RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 GLP2RO95838 553 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 CCNA2P20248 432 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ATP4AP20648 1035 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 GRK3P35626 688 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 MPP3Q13368 585 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 TDRD10Q5VZ19 366 aaKnown RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 CAMK1DQ8IU85 385 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ACTRT2Q8TDY3 377 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ZNF512Q96ME7 567 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 PIDD1Q9HB75 910 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 AHSPQ9NZD4 102 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 TRHDEQ9UKU6 1024 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 MGAT4DA6NG13 374 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 GLI1P08151 1106 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ALOX5P09917 674 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 CYP11B2P19099 503 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms