RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 CMTR2Q8IYT2 770 aaKnown RBP16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 FBXO25Q8TCJ0 367 aa16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 NTAN1Q96AB6 310 aa16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 ZNF558Q96NG5 402 aa16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 MTMR11A4FU01 709 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 GOLGA6BA6NDN3 693 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 NDC80O14777 642 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 EFEMP2O95967 443 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 MTMR3Q13615 1198 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 BTG3Q14201 252 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 NOMO1Q15155 1222 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 DDR2Q16832 855 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 ARHGAP18Q8N392 663 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 PLD5Q8N7P1 536 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 ATAD1Q8NBU5 361 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 PCDH19Q8TAB3 1148 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 ADAM32Q8TC27 787 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 RSAD2Q8WXG1 361 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 KCTD15Q96SI1 283 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 TMEM121Q9BTD3 319 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 IL23AQ9NPF7 189 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 TMEM51Q9NW97 253 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 MTMR10Q9NXD2 777 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 FBXW11Q9UKB1 542 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 SCML2Q9UQR0 700 aa16.32■□□□□ 0.2
HERPUD1-201ENST00000300302 SPDYE4A6NLX3 237 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 H3BRJ5 948 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 PECAM1P16284 738 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 LAG3P18627 525 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 KLRC2P26717 231 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 ADRA1BP35368 520 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 SCAPQ12770 1279 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 MGAT5BQ3V5L5 792 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 HSP90B2PQ58FF3 399 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 FAM117BQ6P1L5 589 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 MON1AQ86VX9 555 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 RNF168Q8IYW5 571 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 PQLC3Q8N755 202 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 FBXO22Q8NEZ5 403 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 RIN2Q8WYP3 895 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 TMEM169Q96HH4 297 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 CSPG4P5Q96PW8 444 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 TSPYL1Q9H0U9 437 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 RC3H2Q9HBD1 1191 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 WDR6Q9NNW5 1121 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 MTRRQ9UBK8 725 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 PRKAG2Q9UGJ0 569 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 BACE2Q9Y5Z0 518 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 CDY1Q9Y6F8 540 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 COL4A4P53420 1690 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 RTN3O95197 1032 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 ACRP10323 421 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 RBP3P10745 1247 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 IVDP26440 423 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 NR2C2P49116 596 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 CXCR3P49682 368 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 VPS41P49754 854 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 RPL10AP62906 217 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 ROR1Q01973 937 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 DHX9Q08211 1270 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 PSMD5Q16401 504 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 CFAP58Q5T655 872 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 SLC8B1Q6J4K2 584 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 C1orf228Q6PIY5 440 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 PRSS55Q6UWB4 352 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 RSPO2Q6UXX9 243 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 RNF19BQ6ZMZ0 732 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 TMC3Q7Z5M5 1100 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 TSEN2Q8NCE0 465 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 PIK3R5Q8WYR1 880 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 RUFY1Q96T51 708 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 WDCPQ9H6R7 721 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 PCDH9Q9HC56 1237 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 CWC15Q9P013 229 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 ANAPC5Q9UJX4 755 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 HEY1Q9Y5J3 304 aa16.31■□□□□ 0.2
HERPUD1-201ENST00000300302 COL4A6Q14031 1691 aa16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 IFNB1P01574 187 aa16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 SOD2P04179 222 aa16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 STIP1P31948 543 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 ZNF135P52742 658 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 KIAA0100Q14667 2235 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 SPDYCQ5MJ68 293 aa16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 DARS2Q6PI48 645 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 DENND5BQ6ZUT9 1274 aa16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 TAC4Q86UU9 113 aa16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 SLC39A11Q8N1S5 342 aa16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 DQX1Q8TE96 717 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 RNF139Q8WU17 664 aa16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 SPATA17Q96L03 361 aa16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 YME1L1Q96TA2 773 aa16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 SEPT5Q99719 369 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 MED4Q9NPJ6 270 aa16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 COMMD8Q9NX08 183 aa16.3■□□□□ 0.2
HERPUD1-201ENST00000300302 H7C0C1 242 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 PPFIA2O75334 1257 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 HAPLN1P10915 354 aaPredicted RBP16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 GOT1P17174 413 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 ATP5OP48047 213 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms