RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 KPNA5O15131 536 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 CDC42EP1Q00587 391 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 CNTN1Q12860 1018 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 IZUMO3Q5VZ72 239 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 SH3BP5LQ7L8J4 393 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 KCNK18Q7Z418 384 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 IFNL2Q8IZJ0 200 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 RDM1Q8NG50 284 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 WNK4Q96J92 1243 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 TCF7L2Q9NQB0 619 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 UMODL1Q5DID0 1318 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 TGDSO95455 350 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 CD4P01730 458 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 CSN2P05814 226 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 CD79BP40259 229 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 CAPZA1P52907 286 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 RHAGQ02094 409 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 SLC5A9Q2M3M2 681 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 TTLL9Q3SXZ7 439 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 ZNF280BQ86YH2 543 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 MIER2Q8N344 545 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 USP38Q8NB14 1042 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 ZNF75CPQ92670 426 aaPredicted RBP4.96□□□□□ -1.61
CSMD3-201ENST00000297405 ENTPD7Q9NQZ7 604 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 TMEM216Q9P0N5 145 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 ADAMTS1Q9UHI8 967 aa4.96□□□□□ -1.61
CSMD3-201ENST00000297405 UBQLN1Q9UMX0 589 aaKnown RBP4.96□□□□□ -1.61
CSMD3-201ENST00000297405 MAGEB2O15479 319 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PGK2P07205 417 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PRKCIP41743 596 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PLIN5Q00G26 463 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 KSR1Q8IVT5 923 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 MCUQ8NE86 351 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PPHLN1Q8NEY8 458 aaKnown RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 NLRP3Q96P20 1036 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 SCGB3A2Q96PL1 93 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 SPATA5L1Q9BVQ7 753 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 GSDMCQ9BYG8 508 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 LRRC4Q9HBW1 653 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 DDX18Q9NVP1 670 aaKnown RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 NSFL1CQ9UNZ2 370 aaKnown RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 FAM240BA0A1B0GVZ2 78 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 GMPSP49915 693 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ARSEP51690 589 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 TNK2Q07912 1038 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PAPD7Q5XG87 772 aaKnown RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 WDR49Q8IV35 697 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 SETD6Q8TBK2 473 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 AGR3Q8TD06 166 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 BTN2A2Q8WVV5 523 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 GINM1Q9NU53 330 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PGRMC2O15173 223 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 KPNA6O60684 536 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 SOX5P35711 763 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 CCNA1P78396 465 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 TNFAIP1Q13829 316 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ZNF284Q2VY69 593 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 NIPAL1Q6NVV3 410 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 DDIASQ8IXT1 998 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 BCL7BQ9BQE9 202 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 SERTAD1Q9UHV2 236 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PLEKHA6Q9Y2H5 1048 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PCDHGC5Q9Y5F6 944 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 V9GY48 417 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ATAD5Q96QE3 1844 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 RPS2P15880 293 aaKnown RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 HNF4AP41235 474 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 TXKP42681 527 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 BCAR1P56945 870 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ERMARDQ5T6L9 678 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 GDPD5Q8WTR4 605 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 EXOC2Q96KP1 924 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 SPAG4Q9NPE6 437 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ZNF624Q9P2J8 865 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 IQGAP3Q86VI3 1631 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ZNF701M0R085 212 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 TRDMT1O14717 391 aaKnown RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PRKD3O94806 890 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 SEC24DO94855 1032 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 EYA4O95677 639 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 FAM153BP0C7A2 387 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 RALAP11233 206 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 CDC16Q13042 620 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PTK7Q13308 1070 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 NR1I3Q14994 352 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ZMYM1Q5SVZ6 1142 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ZNF564Q8TBZ8 553 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 CCDC17Q96LX7 622 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PAK6Q9NQU5 681 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 SSR3Q9UNL2 185 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 EIF3LQ9Y262 564 aaKnown RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 IGF1RP08069 1367 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 TSPAN4O14817 238 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 SOAT2O75908 522 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 MLNP12872 115 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 NPTX2P47972 431 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 TSGA10IPQ3SY00 556 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 FSTL5Q8N475 847 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ASB15Q8WXK1 588 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 SGF29Q96ES7 293 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms