RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 MIS12Q9H081 205 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 EPC1Q9H2F5 836 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 ACP6Q9NPH0 428 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 SPHK2Q9NRA0 654 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 ST7Q9NRC1 585 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 LMBRD1Q9NUN5 540 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 DNAJC17Q9NVM6 304 aaKnown RBP10.25□□□□□ -0.77
CCDC58-201ENST00000291458 MARCH2Q9P0N8 246 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 USP18Q9UMW8 372 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.25□□□□□ -0.77
CCDC58-201ENST00000291458 FAM186AA6NE01 2351 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 MYO18AQ92614 2054 aaKnown RBP10.24□□□□□ -0.77
CCDC58-201ENST00000291458 SPAG17Q6Q759 2223 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 K7EQS6 105 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 P4HA2O15460 535 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 THAP12O43422 761 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 LILRB5O75023 590 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 ATG13O75143 517 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 TULP3O75386 442 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 STC2O76061 302 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 LETM1O95202 739 aaPredicted RBP10.24□□□□□ -0.77
CCDC58-201ENST00000291458 PAEPP09466 180 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 TYRP14679 529 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 SLC9A1P19634 815 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 DGKEP52429 567 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 MARSP56192 900 aaKnown RBP10.24□□□□□ -0.77
CCDC58-201ENST00000291458 CCDC6Q16204 474 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 FBXO43Q4G163 708 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 RAB41Q5JT25 222 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 GRAMD4Q6IC98 578 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 ANO7Q6IWH7 933 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 PMF1Q6P1K2 205 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 DENND1BQ6P3S1 775 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 TRIM65Q6PJ69 517 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 GBP6Q6ZN66 633 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 TADA2BQ86TJ2 420 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 DENND1CQ8IV53 801 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 PASD1Q8IV76 773 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 FMNL3Q8IVF7 1028 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 ADGRG2Q8IZP9 1017 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 MLKLQ8NB16 471 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 TXNDC5Q8NBS9 432 aaKnown RBP10.24□□□□□ -0.77
CCDC58-201ENST00000291458 GPT2Q8TD30 523 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 USP33Q8TEY7 942 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 RNF139Q8WU17 664 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 RUBCNQ92622 972 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 FAXDC2Q96IV6 333 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 FAM126AQ9BYI3 521 aaPredicted RBP10.24□□□□□ -0.77
CCDC58-201ENST00000291458 SEMA4AQ9H3S1 761 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 TAB2Q9NYJ8 693 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 BCCIPQ9P287 314 aaKnown RBP eCLIP10.24□□□□□ -0.77
CCDC58-201ENST00000291458 SFMBT1Q9UHJ3 866 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 AJAP1Q9UKB5 411 aaPredicted RBP10.24□□□□□ -0.77
CCDC58-201ENST00000291458 STRIP2Q9ULQ0 834 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 USP3Q9Y6I4 520 aa10.24□□□□□ -0.77
CCDC58-201ENST00000291458 ZFHX2Q9C0A1 2572 aaPredicted RBP10.24□□□□□ -0.77
CCDC58-201ENST00000291458 TBC1D3BA6NDS4 549 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 YJEFN3A6XGL0 299 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.23□□□□□ -0.77
CCDC58-201ENST00000291458 E7ENQ6 273 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 DCLK1O15075 740 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 AXIN1O15169 862 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 GREM1O60565 184 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 TSPAN3O60637 253 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 RPP40O75818 363 aaKnown RBP10.23□□□□□ -0.77
CCDC58-201ENST00000291458 ADH1BP00325 375 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 PLA2G4AP47712 749 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 ZNF132P52740 706 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 DAOAP59103 153 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 GCNT1Q02742 428 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 SPEM2Q0P670 501 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 EXOC3L4Q17RC7 722 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 FOXR2Q6PJQ5 311 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 LCLAT1Q6UWP7 414 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 TOGARAM2Q6ZUX3 1019 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 BHLHA9Q7RTU4 235 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 WDR5BQ86VZ2 330 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 IRF2BP1Q8IU81 584 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 FAM114A1Q8IWE2 563 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 ARHGAP18Q8N392 663 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 HMGB4Q8WW32 186 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 NELL1Q92832 810 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 FAM149B1Q96BN6 582 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 OTUB2Q96DC9 234 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 CDK5RAP1Q96SZ6 601 aaKnown RBP10.23□□□□□ -0.77
CCDC58-201ENST00000291458 DEC1Q9P2X7 70 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 DACH1Q9UI36 760 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 SDK1Q7Z5N4 2213 aa10.23□□□□□ -0.77
CCDC58-201ENST00000291458 PTPRZ1P23471 2315 aaPredicted RBP10.23□□□□□ -0.77
CCDC58-201ENST00000291458 GPR179Q6PRD1 2367 aa10.22□□□□□ -0.77
CCDC58-201ENST00000291458 TCRBV21S2A2A0A5A6 115 aa10.22□□□□□ -0.77
CCDC58-201ENST00000291458 KCNJ18B7U540 433 aa10.22□□□□□ -0.77
CCDC58-201ENST00000291458 GOLGA6L22H0YM25 854 aa10.22□□□□□ -0.77
CCDC58-201ENST00000291458 SGK1O00141 431 aa10.22□□□□□ -0.77
CCDC58-201ENST00000291458 PMM2O15305 246 aa10.22□□□□□ -0.77
CCDC58-201ENST00000291458 HOXC11O43248 304 aaPredicted RBP10.22□□□□□ -0.77
CCDC58-201ENST00000291458 PAPSS2O95340 614 aaPredicted RBP10.22□□□□□ -0.77
CCDC58-201ENST00000291458 APBB3O95704 486 aa10.22□□□□□ -0.77
CCDC58-201ENST00000291458 KLKB1P03952 638 aa10.22□□□□□ -0.77
CCDC58-201ENST00000291458 HNRNPLP14866 589 aaKnown RBP eCLIP10.22□□□□□ -0.779e-7■□□□□ 10.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms