RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 DYNLT1P63172 113 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 HIF1AQ16665 826 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 C15orf59Q2T9L4 293 aaPredicted RBP19■□□□□ 0.63
PDLIM3-201ENST00000284767 PLEKHG4Q58EX7 1191 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 ADGRD1Q6QNK2 874 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 NME8Q8N427 588 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 ZNF276Q8N554 614 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 ATP11CQ8NB49 1132 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 ZNF333Q96JL9 665 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 DHRS4Q9BTZ2 278 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 CADM1Q9BY67 442 aaKnown RBP19■□□□□ 0.63
PDLIM3-201ENST00000284767 RNF186Q9NXI6 227 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 HAUS5O94927 633 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 ASGR1P07306 291 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 RARBP10826 455 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 ADORA2BP29275 332 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 CDO1Q16878 200 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 KLHL38Q2WGJ6 581 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 TAF2Q6P1X5 1199 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 SCUBE3Q8IX30 993 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 TRIM55Q9BYV6 548 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 TMEM88BA6NKF7 163 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 SEPT4O43236 478 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 DNAJC6O75061 913 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 ADAMTS4O75173 837 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 NEFHP12036 1026 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 FAM182AQ5T1J6 154 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 IRGCQ6NXR0 463 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 MRRFQ96E11 262 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 PTCD3Q96EY7 689 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 C10orf88Q9H8K7 445 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 XPNPEP3Q9NQH7 507 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 KANSL3Q9P2N6 904 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 FARP1Q9Y4F1 1045 aaPredicted RBP18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 PDCD11Q14690 1871 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 CLUHO75153 1309 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 hCG_1818297A0A087WSY0 165 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 C3orf70A6NLC5 250 aaPredicted RBP18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 PDHA1P08559 390 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 CDKN2BP42772 138 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 MXRA7P84157 204 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 KHDC1Q4VXA5 237 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 XKR4Q5GH76 650 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 TFDP3Q5H9I0 405 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 MIS12Q9H081 205 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 ACSS3Q9H6R3 686 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 MANSC1Q9H8J5 431 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 AGO3Q9H9G7 860 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 NMRK1Q9NWW6 199 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 WDR35Q9P2L0 1181 aa18.99■□□□□ 0.63
PDLIM3-201ENST00000284767 ENO4A6NNW6 628 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 PRKAR2AP13861 404 aaKnown RBP18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 KCNE1P15382 129 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 MIPP30301 263 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 ARL4CP56559 192 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 CCDC6Q16204 474 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 KCNA10Q16322 511 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 PKDCCQ504Y2 493 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 RFWD2Q8NHY2 731 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 TCP10LQ8TDR4 215 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 CLEC4CQ8WTT0 213 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 PYROXD1Q8WU10 500 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 MZB1Q8WU39 189 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 HSPH1Q92598 858 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 FAM136AQ96C01 138 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 NSL1Q96IY1 281 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 PEBP4Q96S96 227 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 GPBP1L1Q9HC44 474 aaPredicted RBP18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 DDX56Q9NY93 547 aaKnown RBP18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 DCTN4Q9UJW0 460 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 LRCH1Q9Y2L9 728 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 NUMBLQ9Y6R0 609 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 SGK1O00141 431 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 MLH1P40692 756 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 OCRLQ01968 901 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 RFWD3Q6PCD5 774 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 ANKMY2Q8IV38 441 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 PPIL6Q8IXY8 311 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 BANPQ8N9N5 519 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 SPDYE1Q8NFV5 336 aaPredicted RBP18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 RXFP2Q8WXD0 754 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 PAFAH2Q99487 392 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 VCXQ9H320 206 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 MTO1Q9Y2Z2 717 aaKnown RBP18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 TRPV2Q9Y5S1 764 aa18.98■□□□□ 0.63
PDLIM3-201ENST00000284767 EIF4E1BA6NMX2 242 aaKnown RBP18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 M0QZ92 97 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 GSC2O15499 205 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 TGDSO95455 350 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 ACAT1P24752 427 aaKnown RBP18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 GNL1P36915 607 aaPredicted RBP18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 LILRA4P59901 499 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 ZRSR2Q15696 482 aaKnown RBP18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 GSTCDQ8NEC7 633 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 GAD1Q99259 594 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 MMADHCQ9H3L0 296 aaPredicted RBP18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 MIOSQ9NXC5 875 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 HEY2Q9UBP5 337 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 CD4P01730 458 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 PDGFRAP16234 1089 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms