RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 HAPLN1P10915 354 aaPredicted RBP17.01■□□□□ 0.31
TPM1-201ENST00000267996 LAG3P18627 525 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 ITIH2P19823 946 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 GPR15P49685 360 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 NME3Q13232 169 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 PPP6R3Q5H9R7 873 aaPredicted RBP17.01■□□□□ 0.31
TPM1-201ENST00000267996 ZNF365Q70YC5 407 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 TSEN2Q8NCE0 465 aaKnown RBP17.01■□□□□ 0.31
TPM1-201ENST00000267996 FBXO22Q8NEZ5 403 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 FBXO25Q8TCJ0 367 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 CCHCR1Q8TD31 782 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 DQX1Q8TE96 717 aaKnown RBP17.01■□□□□ 0.31
TPM1-201ENST00000267996 SPATA17Q96L03 361 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 CSPG4P5Q96PW8 444 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 FMO2Q99518 471 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 CRISPLD1Q9H336 500 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 FBXO44Q9H4M3 255 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 COMMD8Q9NX08 183 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 DDIT4Q9NX09 232 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 OGFRQ9NZT2 677 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 CWC15Q9P013 229 aaKnown RBP17.01■□□□□ 0.31
TPM1-201ENST00000267996 ASIC3Q9UHC3 531 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 MRPL42Q9Y6G3 142 aaKnown RBP17.01■□□□□ 0.31
TPM1-201ENST00000267996 MKI67P46013 3256 aaKnown RBP17■□□□□ 0.31
TPM1-201ENST00000267996 APOL1O14791 398 aa17■□□□□ 0.31
TPM1-201ENST00000267996 ADAM12O43184 909 aa17■□□□□ 0.31
TPM1-201ENST00000267996 KRT14P02533 472 aa17■□□□□ 0.31
TPM1-201ENST00000267996 SOD2P04179 222 aa17■□□□□ 0.31
TPM1-201ENST00000267996 ZFXP17010 805 aaPredicted RBP17■□□□□ 0.31
TPM1-201ENST00000267996 EN2P19622 333 aaPredicted RBP17■□□□□ 0.31
TPM1-201ENST00000267996 PGFP49763 221 aa17■□□□□ 0.31
TPM1-201ENST00000267996 PLTPP55058 493 aa17■□□□□ 0.31
TPM1-201ENST00000267996 ARPP19P56211 112 aa17■□□□□ 0.31
TPM1-201ENST00000267996 BTG3Q14201 252 aaPredicted RBP17■□□□□ 0.31
TPM1-201ENST00000267996 PSMD5Q16401 504 aa17■□□□□ 0.31
TPM1-201ENST00000267996 FAM117BQ6P1L5 589 aa17■□□□□ 0.31
TPM1-201ENST00000267996 RHBDF2Q6PJF5 856 aa17■□□□□ 0.31
TPM1-201ENST00000267996 TAC4Q86UU9 113 aa17■□□□□ 0.31
TPM1-201ENST00000267996 MON1AQ86VX9 555 aa17■□□□□ 0.31
TPM1-201ENST00000267996 ADAM32Q8TC27 787 aa17■□□□□ 0.31
TPM1-201ENST00000267996 TRAF3IP1Q8TDR0 691 aaPredicted RBP17■□□□□ 0.31
TPM1-201ENST00000267996 RIN2Q8WYP3 895 aaPredicted RBP17■□□□□ 0.31
TPM1-201ENST00000267996 SNF8Q96H20 258 aa17■□□□□ 0.31
TPM1-201ENST00000267996 TXLNGYQ9BZA5 131 aa17■□□□□ 0.31
TPM1-201ENST00000267996 MCOLN1Q9GZU1 580 aa17■□□□□ 0.31
TPM1-201ENST00000267996 FAM204AQ9H8W3 233 aa17■□□□□ 0.31
TPM1-201ENST00000267996 PTPRSQ13332 1948 aa17■□□□□ 0.31
TPM1-201ENST00000267996 I6L893 689 aaPredicted RBP16.99■□□□□ 0.31
TPM1-201ENST00000267996 MCF2LO15068 1137 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 ATF2P15336 505 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 EIF3EP60228 445 aaKnown RBP16.99■□□□□ 0.31
TPM1-201ENST00000267996 SEMA3BQ13214 749 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 SDHAF4Q5VUM1 108 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 NPNTQ6UXI9 565 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 PYROXD2Q8N2H3 581 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 COLGALT1Q8NBJ5 622 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 P3H4Q92791 437 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 LRRC45Q96CN5 670 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 CEP295NLQ96MC4 621 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 HERC2P3Q9BVR0 1158 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 SMOC2Q9H3U7 446 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 NMUR1Q9HB89 426 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 PCDH9Q9HC56 1237 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 ANLNQ9NQW6 1124 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 TMEM51Q9NW97 253 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 CDY1Q9Y6F8 540 aa16.99■□□□□ 0.31
TPM1-201ENST00000267996 SYNJ2BP-COX16A0A087WUM0 186 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 WDR27A2RRH5 827 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 RTN3O95197 1032 aaPredicted RBP16.98■□□□□ 0.31
TPM1-201ENST00000267996 USP46P62068 366 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 ROR1Q01973 937 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 DSG1Q02413 1049 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 PPIGQ13427 754 aaKnown RBP eCLIP16.98■□□□□ 0.311e-7■■□□□ 14.5
TPM1-201ENST00000267996 TRIP13Q15645 432 aaPredicted RBP16.98■□□□□ 0.31
TPM1-201ENST00000267996 EFHC2Q5JST6 749 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 SPOUT1Q5T280 376 aaKnown RBP16.98■□□□□ 0.31
TPM1-201ENST00000267996 BTBD8Q5XKL5 378 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 MSANTD2Q6P1R3 559 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 GSTA5Q7RTV2 222 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 TMC3Q7Z5M5 1100 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 ARHGAP18Q8N392 663 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 GLIS1Q8NBF1 620 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 TMEM169Q96HH4 297 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 TMEM121Q9BTD3 319 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 PRDM10Q9NQV6 1147 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 TMPRSS4Q9NRS4 437 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.98■□□□□ 0.31
TPM1-201ENST00000267996 SPG21Q9NZD8 308 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 COX16Q9P0S2 106 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 SLC27A5Q9Y2P5 690 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 ALPK3Q96L96 1907 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 GREB1Q4ZG55 1949 aa16.98■□□□□ 0.31
TPM1-201ENST00000267996 A0A1W2PQH9 124 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 H3BRJ5 948 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 IRAK2O43187 625 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 PPFIA2O75334 1257 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 RBP3P10745 1247 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 GOT1P17174 413 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 ADCY8P40145 1251 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 ARL4AP40617 200 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms