RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 KIAA1841Q6NSI8 718 aa12.98□□□□□ -0.33
HERC6-201ENST00000264346 DPY19L2P1Q6NXN4 242 aa12.98□□□□□ -0.33
HERC6-201ENST00000264346 TRABD2AQ86V40 505 aa12.98□□□□□ -0.33
HERC6-201ENST00000264346 AGAP11Q8TF27 550 aa12.98□□□□□ -0.33
HERC6-201ENST00000264346 HDAC11Q96DB2 347 aa12.98□□□□□ -0.33
HERC6-201ENST00000264346 PIWIL1Q96J94 861 aaKnown RBP12.98□□□□□ -0.33
HERC6-201ENST00000264346 RMDN2Q96LZ7 410 aa12.98□□□□□ -0.33
HERC6-201ENST00000264346 SRPK1Q96SB4 655 aaKnown RBP12.98□□□□□ -0.33
HERC6-201ENST00000264346 TRIM56Q9BRZ2 755 aaKnown RBP12.98□□□□□ -0.33
HERC6-201ENST00000264346 ULBP1Q9BZM6 244 aa12.98□□□□□ -0.33
HERC6-201ENST00000264346 SCN9AQ15858 1988 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 DGKIO75912 1065 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 ITGAVP06756 1048 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 SMIM10L2AP0DMW4 78 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 SMIM10L2BP0DMW5 78 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 LMO2P25791 158 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 AQP5P55064 265 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 RAB6CQ53S08 254 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 LRRC38Q5VT99 294 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 CCT6BQ92526 530 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 BHMTQ93088 406 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 PGLYRP2Q96PD5 576 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 RAB6CQ9H0N0 254 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 SDCBP2Q9H190 292 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 ACSS2Q9NR19 701 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 TCRBV9S1A1TA0A576 114 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 RNF103O00237 685 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 GIPC1O14908 333 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 TREHO43280 583 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 OPHN1O60890 802 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 F7P08709 466 aaPredicted RBP12.97□□□□□ -0.33
HERC6-201ENST00000264346 CPB1P15086 417 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 TGM2P21980 687 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 ACADSBP45954 432 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 SERPINB4P48594 390 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 USP10Q14694 798 aaKnown RBP12.97□□□□□ -0.33
HERC6-201ENST00000264346 CA9Q16790 459 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 PRPF39Q86UA1 669 aaKnown RBP12.97□□□□□ -0.33
HERC6-201ENST00000264346 MYLK4Q86YV6 388 aaPredicted RBP12.97□□□□□ -0.33
HERC6-201ENST00000264346 TBCBQ99426 244 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 TMEM120AQ9BXJ8 343 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 RXFP1Q9HBX9 757 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 SSX2IPQ9Y2D8 614 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 RASSF9O75901 435 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 MX2P20592 715 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 ELF3P78545 371 aaPredicted RBP12.97□□□□□ -0.33
HERC6-201ENST00000264346 CYP1B1Q16678 543 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 ILDR2Q71H61 639 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 SPATA2LQ8IUW3 424 aaPredicted RBP12.97□□□□□ -0.33
HERC6-201ENST00000264346 TASP1Q9H6P5 420 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 RRAGCQ9HB90 399 aa12.97□□□□□ -0.33
HERC6-201ENST00000264346 STRNO43815 780 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 ATP5HO75947 161 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 TMEM63AO94886 807 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 POLBP06746 335 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 THP07101 528 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 ERVK-10P10266 1014 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 SOX11P35716 441 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 CASP2P42575 452 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 GRAMD1BQ3KR37 738 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 HABP4Q5JVS0 413 aaKnown RBP12.96□□□□□ -0.33
HERC6-201ENST00000264346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.96□□□□□ -0.33
HERC6-201ENST00000264346 SLC26A7Q8TE54 656 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 ATXN2LQ8WWM7 1075 aaKnown RBP12.96□□□□□ -0.33
HERC6-201ENST00000264346 HTR3CQ8WXA8 447 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 CCDC68Q9H2F9 335 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 FBXO6Q9NRD1 293 aaPredicted RBP12.96□□□□□ -0.33
HERC6-201ENST00000264346 ETNK2Q9NVF9 386 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 DRG1Q9Y295 367 aaKnown RBP12.96□□□□□ -0.33
HERC6-201ENST00000264346 MYH9P35579 1960 aaKnown RBP12.96□□□□□ -0.33
HERC6-201ENST00000264346 LAMB2P55268 1798 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 GOLGA8QA0A0J9YX86 632 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 GOLGA8OA6NCC3 632 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 GOLGA8NF8WBI6 632 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 GRIN3BO60391 1043 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 C22orf31O95567 290 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 BDNFP23560 247 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 SCNN1GP51170 649 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 HSP90AA5PQ58FG0 334 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 POLNQ7Z5Q5 900 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 POU5F2Q8N7G0 328 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 TSC22D3Q99576 134 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 SYT15Q9BQS2 421 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 SYT11Q9BT88 431 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 OSBPL1AQ9BXW6 950 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 WWP1Q9H0M0 922 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 FZD8Q9H461 694 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 LRFN2Q9ULH4 789 aa12.96□□□□□ -0.33
HERC6-201ENST00000264346 C3orf70A6NLC5 250 aaPredicted RBP12.96□□□□□ -0.34
HERC6-201ENST00000264346 ALOX15BO15296 676 aa12.96□□□□□ -0.34
HERC6-201ENST00000264346 TSPAN1O60635 241 aa12.96□□□□□ -0.34
HERC6-201ENST00000264346 PSMB4P28070 264 aa12.96□□□□□ -0.34
HERC6-201ENST00000264346 CPT1AP50416 773 aa12.96□□□□□ -0.34
HERC6-201ENST00000264346 CUL3Q13618 768 aa12.96□□□□□ -0.34
HERC6-201ENST00000264346 FAM117BQ6P1L5 589 aa12.96□□□□□ -0.34
HERC6-201ENST00000264346 CCDC97Q96F63 343 aaPredicted RBP12.96□□□□□ -0.34
HERC6-201ENST00000264346 PCDH18Q9HCL0 1135 aa12.96□□□□□ -0.34
HERC6-201ENST00000264346 SIX4Q9UIU6 781 aa12.96□□□□□ -0.34
HERC6-201ENST00000264346 SDR42E2A6NKP2 422 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms