RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 OASLQ15646 514 aaKnown RBP17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 MOSPD2Q8NHP6 518 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 TFR2Q9UP52 801 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 MSH4O15457 936 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 KBTBD4Q9NVX7 518 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 SF3B1O75533 1304 aaKnown RBP eCLIP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 URB1O60287 2271 aaKnown RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 MAGEA10P43363 369 aaPredicted RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 INAQ16352 499 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 EPC2Q52LR7 807 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 ANKS6Q68DC2 871 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 HDHD2Q9H0R4 259 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 NCF1BA6NI72 391 aaPredicted RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 NCF1CA8MVU1 366 aaPredicted RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 SLC37A4O43826 429 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 EGFRP00533 1210 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 CSF1RP07333 972 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 NCF1P14598 390 aaPredicted RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 ARMC4Q5T2S8 1044 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 LPCAT2Q7L5N7 544 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 ADGRF2Q8IZF7 708 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 ATG4AQ8WYN0 398 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 RMND5BQ96G75 393 aaPredicted RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 APOL4Q9BPW4 351 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 TBC1D13Q9NVG8 400 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 LRCH1Q9Y2L9 728 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 CPS1P31327 1500 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 B3GAT3O94766 335 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 KLHL18O94889 574 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 SGPL1O95470 568 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 SH3BP5LQ7L8J4 393 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 LHX1P48742 406 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 SAMD3Q8N6K7 520 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 DUSP10Q9Y6W6 482 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 C17orf102A2RUQ5 167 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 GLRBP48167 497 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 ZNF34Q8IZ26 560 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 SVOPQ8N4V2 548 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 FBXO32Q969P5 355 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 NARS2Q96I59 477 aaKnown RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 FAM220BPB1ANY3 271 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 GPR182O15218 404 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 RPS7P62081 194 aaKnown RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 ZCCHC8Q6NZY4 707 aaKnown RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 LRRC71Q8N4P6 559 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 INTS13Q9NVM9 706 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 RIMS1Q86UR5 1692 aaKnown RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 KPNA4O00629 521 aaPredicted RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 HPGDP15428 266 aa17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 ACSF2Q96CM8 615 aaPredicted RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 EPB41L4AQ9HCS5 686 aaPredicted RBP17.93■□□□□ 0.46
NOTCH3-201ENST00000263388 DYNC1LI2O43237 492 aaPredicted RBP17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 FAM58BPP0C7Q3 252 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 SREBF1P36956 1147 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 KLHL24Q6TFL4 600 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 DEFB107AQ8IZN7 70 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 GANQ9H2C0 597 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 DDX20Q9UHI6 824 aaKnown RBP17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 CNTRLQ7Z7A1 2325 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 FYNP06241 537 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 PIK3R1P27986 724 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 GRTP1Q5TC63 336 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 SERAC1Q96JX3 654 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 KLHL3Q9UH77 587 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 ACOT9Q9Y305 439 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 ANTXR2P58335 489 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 CYP3A43Q9HB55 503 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 DYRK1BQ9Y463 629 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 VPS4BO75351 444 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 C1QBPQ07021 282 aaKnown RBP17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 TAF1CQ15572 869 aaPredicted RBP17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 ZNF484Q5JVG2 852 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 FAM172AQ8WUF8 416 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 FAM192AQ9GZU8 254 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 ZFYVE28Q9HCC9 887 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 IARS2Q9NSE4 1012 aaKnown RBP17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 ZNF70Q9UC06 446 aaPredicted RBP17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 KLHL41O60662 606 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 IZUMO2Q6UXV1 221 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 C11orf74Q86VG3 221 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 TRAPPC9Q96Q05 1148 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 TINF2Q9BSI4 451 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 DNAJC16Q9Y2G8 782 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 RNASEH1O60930 286 aaKnown RBP17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 TTI2Q6NXR4 508 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 KRT74Q7RTS7 529 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 RNF180Q86T96 592 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 RPRD1AQ96P16 312 aaPredicted RBP17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 MYOZ2Q9NPC6 264 aa17.92■□□□□ 0.46
NOTCH3-201ENST00000263388 CRABP2P29373 138 aa17.91■□□□□ 0.46
NOTCH3-201ENST00000263388 GNASQ5JWF2 1037 aa17.91■□□□□ 0.46
NOTCH3-201ENST00000263388 SGF29Q96ES7 293 aa17.91■□□□□ 0.46
NOTCH3-201ENST00000263388 AVENQ9NQS1 362 aaPredicted RBP17.91■□□□□ 0.46
NOTCH3-201ENST00000263388 ATAD3AQ9NVI7 634 aa17.91■□□□□ 0.46
NOTCH3-201ENST00000263388 TMEM51Q9NW97 253 aa17.91■□□□□ 0.46
NOTCH3-201ENST00000263388 TBKBP1A7MCY6 615 aa17.91■□□□□ 0.46
NOTCH3-201ENST00000263388 CPA3P15088 417 aa17.91■□□□□ 0.46
NOTCH3-201ENST00000263388 MFSD4BQ5TF39 518 aa17.91■□□□□ 0.46
NOTCH3-201ENST00000263388 MPZL3Q6UWV2 235 aa17.91■□□□□ 0.46
NOTCH3-201ENST00000263388 FBXO33Q7Z6M2 555 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms