RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 NCKAP1LP55160 1127 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 CSTF3Q12996 717 aaKnown RBP12.43□□□□□ -0.42
COL8A1-201ENST00000261037 ERMARDQ5T6L9 678 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 LRRC8DQ7L1W4 858 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 DEFB132Q7Z7B7 95 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 CCDC103Q8IW40 242 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 CASP10Q92851 521 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 UBXN6Q9BZV1 441 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 PLAGL2Q9UPG8 496 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 GJB6O95452 261 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 CCDC130P13994 396 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 SLC2A4P14672 509 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 VCLP18206 1134 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 SYTL5Q8TDW5 730 aaPredicted RBP12.43□□□□□ -0.42
COL8A1-201ENST00000261037 UCMAQ8WVF2 138 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 EMILIN2Q9BXX0 1053 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 FRMD8Q9BZ67 464 aaPredicted RBP12.43□□□□□ -0.42
COL8A1-201ENST00000261037 NMRK1Q9NWW6 199 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 PDHXO00330 501 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 SYNCRIPO60506 623 aaKnown RBP12.43□□□□□ -0.42
COL8A1-201ENST00000261037 PQBP1O60828 265 aaKnown RBP12.43□□□□□ -0.42
COL8A1-201ENST00000261037 ZCCHC18P0CG32 403 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 FGFR2P21802 821 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 DEFA1P59665 94 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 DEFA3P59666 94 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 MMRN1Q13201 1228 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 ZNF280DQ6N043 979 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 ERO1BQ86YB8 467 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 ELOA2Q8IYF1 753 aaPredicted RBP12.43□□□□□ -0.42
COL8A1-201ENST00000261037 DPF3Q92784 378 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 MROH8Q9H579 483 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 SMPD4Q9NXE4 827 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 TSPAN16Q9UKR8 245 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 DSEQ9UL01 958 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 NBNO60934 754 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 TOMM70O94826 608 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 FBXO21O94952 628 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 BFSP2Q13515 415 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 CYP2W1Q8TAV3 490 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 MTERF3Q96E29 417 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 SERAC1Q96JX3 654 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 SH3GL3Q99963 347 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 CTNNAL1Q9UBT7 734 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 AK9Q5TCS8 1911 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 O00370 1275 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 F9P00740 461 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 CHRNB3Q05901 458 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 FBXO47Q5MNV8 452 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 CNPY3Q9BT09 278 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 EFCAB1Q9HAE3 211 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 TLR8Q9NR97 1041 aaKnown RBP12.42□□□□□ -0.42
COL8A1-201ENST00000261037 TRPC4Q9UBN4 977 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 SAC3D1A6NKF1 404 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 HSMCR30P0CW71 290 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 INSRRP14616 1297 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 CPA3P15088 417 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 HNRNPH1P31943 449 aaKnown RBP12.42□□□□□ -0.42
COL8A1-201ENST00000261037 RASA2Q15283 850 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 TRMT11Q7Z4G4 463 aaKnown RBP12.42□□□□□ -0.42
COL8A1-201ENST00000261037 GPR141Q7Z602 305 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 FAR2Q96K12 515 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 ROGDIQ9GZN7 287 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 MPP6Q9NZW5 540 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 SNCAIPQ9Y6H5 919 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 SH3BGRLO75368 114 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 NFIL3Q16649 462 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 CYB5D1Q6P9G0 228 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 DOK6Q6PKX4 331 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 FIG4Q92562 907 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 MTFMTQ96DP5 389 aaKnown RBP12.42□□□□□ -0.42
COL8A1-201ENST00000261037 CCDC126Q96EE4 140 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 SYT15Q9BQS2 421 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 ADGRE3Q9BY15 652 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 C10orf88Q9H8K7 445 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 RRAGCQ9HB90 399 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 RBM22Q9NW64 420 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL8A1-201ENST00000261037 TAGLN3Q9UI15 199 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 TMCC3Q9ULS5 477 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 TMX2Q9Y320 296 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 REREQ9P2R6 1566 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 GOLGA8TH3BQL2 631 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 MAP3K13O43283 966 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 MSH3P20585 1137 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 MGAT1P26572 445 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 GSSP48637 474 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 PPATQ06203 517 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 MPP3Q13368 585 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 ITIH4Q14624 930 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 ILDR2Q71H61 639 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 ARHGAP20Q9P2F6 1191 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 NFKBIL1Q9UBC1 381 aaPredicted RBP12.42□□□□□ -0.42
COL8A1-201ENST00000261037 KIAA1257Q9ULG3 409 aa12.42□□□□□ -0.42
COL8A1-201ENST00000261037 HPGDP15428 266 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 SERPINB1P30740 379 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 ITGA11Q9UKX5 1188 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 DRG1Q9Y295 367 aaKnown RBP12.41□□□□□ -0.42
COL8A1-201ENST00000261037 PIK3CDO00329 1044 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 AGKQ53H12 422 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 SLC30A9Q6PML9 568 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 RIPOR1Q6ZS17 1223 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms