RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 FUBP3Q96I24 572 aaKnown RBP eCLIP23.23■■□□□ 1.31
SIX3-201ENST00000260653 DDIT4Q9NX09 232 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 CWC15Q9P013 229 aaKnown RBP23.23■■□□□ 1.31
SIX3-201ENST00000260653 ANAPC5Q9UJX4 755 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 ZNF638Q14966 1978 aaKnown RBP23.23■■□□□ 1.31
SIX3-201ENST00000260653 MAP3K6O95382 1288 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 GOT1P17174 413 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 MTMR3Q13615 1198 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 DDR2Q16832 855 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 RSPO2Q6UXX9 243 aaPredicted RBP23.23■■□□□ 1.31
SIX3-201ENST00000260653 TMCO2Q7Z6W1 182 aaPredicted RBP23.23■■□□□ 1.31
SIX3-201ENST00000260653 UNC45BQ8IWX7 931 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 ATAD1Q8NBU5 361 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 CCHCR1Q8TD31 782 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 PCDH9Q9HC56 1237 aa23.23■■□□□ 1.31
SIX3-201ENST00000260653 PRDM5Q9NQX1 630 aaPredicted RBP23.23■■□□□ 1.31
SIX3-201ENST00000260653 COL4A4P53420 1690 aaPredicted RBP23.23■■□□□ 1.31
SIX3-201ENST00000260653 COL4A6Q14031 1691 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 DGKIO75912 1065 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 TGM2P21980 687 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 CHKAP35790 457 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 GPS1Q13098 491 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 CCDC25Q86WR0 208 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 ADAM7Q9H2U9 754 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 FAM204AQ9H8W3 233 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 ANLNQ9NQW6 1124 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 AAASQ9NRG9 546 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 PCDHB5Q9Y5E4 795 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 MYO16Q9Y6X6 1858 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 OR6C75A6NL08 312 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 AMHP03971 560 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 PGFP49763 221 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 ELAVL2Q12926 359 aaKnown RBP23.22■■□□□ 1.31
SIX3-201ENST00000260653 OR2W6PQ8NHA6 318 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 RSAD2Q8WXG1 361 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 SH3GL2Q99962 352 aa23.22■■□□□ 1.31
SIX3-201ENST00000260653 LAMA2P24043 3122 aaKnown RBP23.21■■□□□ 1.31
SIX3-201ENST00000260653 TRIM43BA6NCK2 446 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 I6L893 689 aaPredicted RBP23.21■■□□□ 1.31
SIX3-201ENST00000260653 RNF40O75150 1001 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 CPB1P15086 417 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 PMS2P54278 862 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 NRLP54845 237 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 PSTKQ8IV42 348 aaKnown RBP23.21■■□□□ 1.31
SIX3-201ENST00000260653 FAM71DQ8N9W8 422 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 TRIM43Q96BQ3 446 aaPredicted RBP23.21■■□□□ 1.31
SIX3-201ENST00000260653 PGAP3Q96FM1 320 aaPredicted RBP23.21■■□□□ 1.31
SIX3-201ENST00000260653 EPB41L4BQ9H329 900 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.21■■□□□ 1.31
SIX3-201ENST00000260653 LTBP2Q14767 1821 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 CSF2RAP15509 400 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 ALDH7A1P49419 539 aaKnown RBP23.21■■□□□ 1.31
SIX3-201ENST00000260653 ROR1Q01973 937 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 UBAP2Q5T6F2 1119 aaKnown RBP23.21■■□□□ 1.31
SIX3-201ENST00000260653 VSTM1Q6UX27 236 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 TAC4Q86UU9 113 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 PWWP2AQ96N64 755 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 CWH43Q9H720 699 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 RRN3Q9NYV6 651 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 MFHAS1Q9Y4C4 1052 aa23.21■■□□□ 1.31
SIX3-201ENST00000260653 H0YGN5 161 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 RFC2P35250 354 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 ADRA1BP35368 520 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 SLC9A7Q96T83 725 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 TTPALQ9BTX7 342 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 SEMA4AQ9H3S1 761 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 ETNK2Q9NVF9 386 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 DNAJC17Q9NVM6 304 aaKnown RBP23.2■■□□□ 1.3
SIX3-201ENST00000260653 NFS1Q9Y697 457 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 DNALI1O14645 258 aaPredicted RBP23.2■■□□□ 1.3
SIX3-201ENST00000260653 AMPD1P23109 780 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 ARL4AP40617 200 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 YWHAGP61981 247 aaKnown RBP eCLIP23.2■■□□□ 1.3
SIX3-201ENST00000260653 CAV1Q03135 178 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 GBE1Q04446 702 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 PKN2Q16513 984 aaKnown RBP23.2■■□□□ 1.3
SIX3-201ENST00000260653 EFHC2Q5JST6 749 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 HIBCHQ6NVY1 386 aaPredicted RBP23.2■■□□□ 1.3
SIX3-201ENST00000260653 FAM117BQ6P1L5 589 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 DARS2Q6PI48 645 aaKnown RBP23.2■■□□□ 1.3
SIX3-201ENST00000260653 PRSS55Q6UWB4 352 aaPredicted RBP23.2■■□□□ 1.3
SIX3-201ENST00000260653 BBOF1Q8ND07 529 aa23.2■■□□□ 1.3
SIX3-201ENST00000260653 DQX1Q8TE96 717 aaKnown RBP23.2■■□□□ 1.3
SIX3-201ENST00000260653 H7C0C1 242 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 TBC1D4O60343 1298 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 SOAT2O75908 522 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 ATP5OP48047 213 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 GYS2P54840 703 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 DEFB103AP81534 67 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 GPR152Q8TDT2 470 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 RNF139Q8WU17 664 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 LRRN4Q8WUT4 740 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 VPS18Q9P253 973 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 FBXW11Q9UKB1 542 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 CREB3O43889 395 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 TIMP1P01033 207 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 FAM182AQ5T1J6 154 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 SCD5Q86SK9 330 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 GOLGA6L1Q8N7Z2 621 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 TOP1MTQ969P6 601 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms