RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 PRDM16Q9HAZ2 1276 aa28.75■■■□□ 2.19
CCM2-201ENST00000258781 LRFN2Q9ULH4 789 aa28.75■■■□□ 2.19
CCM2-201ENST00000258781 CFAP69A5D8W1 941 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 NRP1O14786 923 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 RPL22P35268 128 aaKnown RBP28.74■■■□□ 2.19
CCM2-201ENST00000258781 IKBKEQ14164 716 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 MFSD5Q6N075 450 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 C1orf228Q6PIY5 440 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 COLGALT2Q8IYK4 626 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 SCML4Q8N228 414 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 OR10T2Q8NGX3 314 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 IRGQQ8WZA9 623 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 C10orf88Q9H8K7 445 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 PNPLA8Q9NP80 782 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 NINJ2Q9NZG7 142 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 FARP1Q9Y4F1 1045 aaPredicted RBP28.74■■■□□ 2.19
CCM2-201ENST00000258781 COL4A4P53420 1690 aaPredicted RBP28.74■■■□□ 2.19
CCM2-201ENST00000258781 SMAPO00193 183 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 C6orf118Q5T5N4 469 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 HFE2Q6ZVN8 426 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 ARFGAP2Q8N6H7 521 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 FAM71DQ8N9W8 422 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 RBM15Q96T37 977 aaKnown RBP eCLIP28.74■■■□□ 2.19
CCM2-201ENST00000258781 DMAP1Q9NPF5 467 aaPredicted RBP28.74■■■□□ 2.19
CCM2-201ENST00000258781 RRN3Q9NYV6 651 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 HCSTQ9UBK5 93 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 DNAJB4Q9UDY4 337 aa28.74■■■□□ 2.19
CCM2-201ENST00000258781 ZBED1O96006 694 aa28.73■■■□□ 2.19
CCM2-201ENST00000258781 FAM131BQ86XD5 332 aa28.73■■■□□ 2.19
CCM2-201ENST00000258781 PPIL6Q8IXY8 311 aa28.73■■■□□ 2.19
CCM2-201ENST00000258781 ABI1Q8IZP0 508 aa28.73■■■□□ 2.19
CCM2-201ENST00000258781 PRCCQ92733 491 aaPredicted RBP28.73■■■□□ 2.19
CCM2-201ENST00000258781 TLCD1Q96CP7 247 aa28.73■■■□□ 2.19
CCM2-201ENST00000258781 PWWP2AQ96N64 755 aa28.73■■■□□ 2.19
CCM2-201ENST00000258781 PHACTR1Q9C0D0 580 aa28.73■■■□□ 2.19
CCM2-201ENST00000258781 LRRC4CQ9HCJ2 640 aa28.73■■■□□ 2.19
CCM2-201ENST00000258781 DNAJC17Q9NVM6 304 aaKnown RBP28.73■■■□□ 2.19
CCM2-201ENST00000258781 BCCIPQ9P287 314 aaKnown RBP eCLIP28.73■■■□□ 2.19
CCM2-201ENST00000258781 YJEFN3A6XGL0 299 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 E7ENQ6 273 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 H7C0C1 242 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 M0QYT0 321 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 FYNP06241 537 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 ATP5OP48047 213 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 CDR1P51861 262 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 SYPL2Q5VXT5 272 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 NPAS4Q8IUM7 802 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 CSPG4P5Q96PW8 444 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 SLC9A7Q96T83 725 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 CAPS2Q9BXY5 557 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 TMLHEQ9NVH6 421 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 COL4A6Q14031 1691 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP28.72■■■□□ 2.19
CCM2-201ENST00000258781 ACSL3O95573 720 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 LTFP02788 710 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 BDNFP23560 247 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 AIF1P55008 147 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 YWHAHQ04917 246 aaPredicted RBP28.72■■■□□ 2.19
CCM2-201ENST00000258781 RNASELQ05823 741 aaKnown RBP28.72■■■□□ 2.19
CCM2-201ENST00000258781 DEUP1Q05D60 604 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 KYNUQ16719 465 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 DNAJC21Q5F1R6 531 aaKnown RBP28.72■■■□□ 2.19
CCM2-201ENST00000258781 ZC3H18Q86VM9 953 aaKnown RBP28.72■■■□□ 2.19
CCM2-201ENST00000258781 RTP4Q96DX8 246 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 RHOBTB2Q9BYZ6 727 aa28.72■■■□□ 2.19
CCM2-201ENST00000258781 NOVA2Q9UNW9 492 aaKnown RBP28.72■■■□□ 2.19
CCM2-201ENST00000258781 BCLAF3A2AJT9 711 aaKnown RBP28.71■■■□□ 2.19
CCM2-201ENST00000258781 CAPN9O14815 690 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 USP17L7P0C7H9 530 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 ACRP10323 421 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 ARL4AP40617 200 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 MAGEA4P43358 317 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 NR2C2P49116 596 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 RABGGTBP53611 331 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 PITX1P78337 314 aaPredicted RBP28.71■■■□□ 2.19
CCM2-201ENST00000258781 PM20D1Q6GTS8 502 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 LRRTM3Q86VH5 581 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 PGAP3Q96FM1 320 aaPredicted RBP28.71■■■□□ 2.19
CCM2-201ENST00000258781 FAM193BQ96PV7 902 aaPredicted RBP28.71■■■□□ 2.19
CCM2-201ENST00000258781 NAALADL1Q9UQQ1 740 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 HEY1Q9Y5J3 304 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 USP3Q9Y6I4 520 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 PTPRSQ13332 1948 aa28.71■■■□□ 2.19
CCM2-201ENST00000258781 UPP2O95045 317 aa28.7■■■□□ 2.19
CCM2-201ENST00000258781 XRCC4Q13426 336 aa28.7■■■□□ 2.19
CCM2-201ENST00000258781 C4orf50Q6ZRC1 276 aa28.7■■■□□ 2.19
CCM2-201ENST00000258781 BHLHA9Q7RTU4 235 aa28.7■■■□□ 2.19
CCM2-201ENST00000258781 UHMK1Q8TAS1 419 aaKnown RBP28.7■■■□□ 2.19
CCM2-201ENST00000258781 CPT1BQ92523 772 aa28.7■■■□□ 2.19
CCM2-201ENST00000258781 TMEM209Q96SK2 561 aa28.7■■■□□ 2.19
CCM2-201ENST00000258781 CWC15Q9P013 229 aaKnown RBP28.7■■■□□ 2.19
CCM2-201ENST00000258781 RASGRF2O14827 1237 aa28.7■■■□□ 2.18
CCM2-201ENST00000258781 ABHD2P08910 425 aa28.7■■■□□ 2.18
CCM2-201ENST00000258781 TMEM199Q8N511 208 aa28.7■■■□□ 2.18
CCM2-201ENST00000258781 NAT8LQ8N9F0 302 aa28.7■■■□□ 2.18
CCM2-201ENST00000258781 NTAN1Q96AB6 310 aa28.7■■■□□ 2.18
CCM2-201ENST00000258781 TTC25Q96NG3 672 aa28.7■■■□□ 2.18
CCM2-201ENST00000258781 STMN4Q9H169 189 aaPredicted RBP28.7■■■□□ 2.18
CCM2-201ENST00000258781 USP29Q9HBJ7 922 aa28.7■■■□□ 2.18
CCM2-201ENST00000258781 TRAPPC3O43617 180 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms