RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 RPS6P62753 249 aaKnown RBP10.07□□□□□ -0.8
IRF1-201ENST00000245414 IFITM2Q01629 132 aa10.07□□□□□ -0.8
IRF1-201ENST00000245414 OXA1LQ15070 435 aa10.07□□□□□ -0.8
IRF1-201ENST00000245414 CCNG2Q16589 344 aa10.07□□□□□ -0.8
IRF1-201ENST00000245414 LSM12Q3MHD2 195 aaKnown RBP10.07□□□□□ -0.8
IRF1-201ENST00000245414 KRT25Q7Z3Z0 450 aa10.07□□□□□ -0.8
IRF1-201ENST00000245414 PTAR1Q7Z6K3 402 aaPredicted RBP10.07□□□□□ -0.8
IRF1-201ENST00000245414 ZSCAN18Q8TBC5 510 aaPredicted RBP10.07□□□□□ -0.8
IRF1-201ENST00000245414 HTRA1Q92743 480 aa10.07□□□□□ -0.8
IRF1-201ENST00000245414 PMEPA1Q969W9 287 aa10.07□□□□□ -0.8
IRF1-201ENST00000245414 ALPK1Q96QP1 1244 aa10.07□□□□□ -0.8
IRF1-201ENST00000245414 MXD3Q9BW11 206 aa10.07□□□□□ -0.8
IRF1-201ENST00000245414 TRIT1Q9H3H1 467 aaKnown RBP10.07□□□□□ -0.8
IRF1-201ENST00000245414 STN1Q9H668 368 aaKnown RBP10.07□□□□□ -0.8
IRF1-201ENST00000245414 MYO3BQ8WXR4 1341 aa10.07□□□□□ -0.8
IRF1-201ENST00000245414 PHRF1Q9P1Y6 1649 aaKnown RBP10.07□□□□□ -0.8
IRF1-201ENST00000245414 SMCO2A6NFE2 343 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 FSCN2O14926 492 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 AKAP3O75969 853 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 HOXD10P28358 340 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 NUDT2P50583 147 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 PKNOX1P55347 436 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 JAM2P57087 298 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 PPP2R2BQ00005 443 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 SF3B3Q15393 1217 aaKnown RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 MAPRE1Q15691 268 aaKnown RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 KLHL38Q2WGJ6 581 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 GJC2Q5T442 439 aaPredicted RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 ATG14Q6ZNE5 492 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 LSMEM1Q8N8F7 131 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 ETNPPLQ8TBG4 499 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 USP13Q92995 863 aaPredicted RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 C8orf48Q96LL4 319 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 HMG20AQ9NP66 347 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 WDR70Q9NW82 654 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 WARS2Q9UGM6 360 aaKnown RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 CAB39Q9Y376 341 aaPredicted RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 MAGEB6P1A0A0J9YX57 407 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 LINC00854A0A1B0GVQ3 168 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 RALAP11233 206 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 HPCAL1P37235 193 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 ZNF135P52742 658 aaPredicted RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 ECT2LQ008S8 904 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 FAM47CQ5HY64 1035 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 LYSMD3Q7Z3D4 306 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 BRSK2Q8IWQ3 736 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 PDCD6IPQ8WUM4 868 aaKnown RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 FIG4Q92562 907 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 APOPT1Q96IL0 206 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 CDK5RAP1Q96SZ6 601 aaKnown RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 RIOK1Q9BRS2 568 aaKnown RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 COQ10BQ9H8M1 238 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 NENFQ9UMX5 172 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 C1orf167Q5SNV9 1468 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 AFDNP55196 1824 aaKnown RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 GOLGA8JA6NMD2 632 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 CLDN25C9JDP6 229 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 E9PMD0 336 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 AURKAO14965 403 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 SNPHO15079 494 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 USP12O75317 370 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 DAB1O75553 588 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 KRT6AP02538 564 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 KRT6BP04259 564 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 PRKCAP17252 672 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 ITGAXP20702 1163 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 CXCR2P25025 360 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 EPHA3P29320 983 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 MARSP56192 900 aaKnown RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 CENPCQ03188 943 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 STX3Q13277 289 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 HIF1AQ16665 826 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 USP41Q3LFD5 358 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 ZFP1Q6P2D0 407 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.06□□□□□ -0.8
IRF1-201ENST00000245414 DNAJC10Q8IXB1 793 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 BRSK1Q8TDC3 778 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 DACT3Q96B18 629 aaPredicted RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 CDRT15Q96T59 188 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 OSBPL11Q9BXB4 747 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 FOXP3Q9BZS1 431 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 PPCSQ9HAB8 311 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 AVENQ9NQS1 362 aaPredicted RBP10.06□□□□□ -0.8
IRF1-201ENST00000245414 SNTG2Q9NY99 539 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 USTQ9Y2C2 406 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 SNX13Q9Y5W8 968 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 DGKBQ9Y6T7 804 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 CROCCQ5TZA2 2017 aa10.06□□□□□ -0.8
IRF1-201ENST00000245414 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
IRF1-201ENST00000245414 A8MX80 341 aa10.05□□□□□ -0.8
IRF1-201ENST00000245414 FOXN3O00409 490 aaPredicted RBP10.05□□□□□ -0.8
IRF1-201ENST00000245414 DCXO43602 365 aa10.05□□□□□ -0.8
IRF1-201ENST00000245414 PDE8AO60658 829 aa10.05□□□□□ -0.8
IRF1-201ENST00000245414 DLGAP3O95886 979 aa10.05□□□□□ -0.8
IRF1-201ENST00000245414 CDH1P12830 882 aa10.05□□□□□ -0.8
IRF1-201ENST00000245414 SLC5A1P13866 664 aa10.05□□□□□ -0.8
IRF1-201ENST00000245414 GLULP15104 373 aa10.05□□□□□ -0.8
IRF1-201ENST00000245414 AKR1B1P15121 316 aa10.05□□□□□ -0.8
IRF1-201ENST00000245414 PTPN1P18031 435 aaKnown RBP10.05□□□□□ -0.8
IRF1-201ENST00000245414 AOC1P19801 751 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms