RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 TDRD15B5MCY1 1934 aaKnown RBP19.19■□□□□ 0.66
HOXC11-201ENST00000243082 ZBED1O96006 694 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 AMPD1P23109 780 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 NR2C2P49116 596 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 XRCC4Q13426 336 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 MBTPS1Q14703 1052 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 LHX8Q68G74 356 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 NCBP2-AS2Q69YL0 99 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 MYLPFQ96A32 169 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 SMARCD1Q96GM5 515 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 UROC1Q96N76 676 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 PKMYT1Q99640 499 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 RGS18Q9NS28 235 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 TSC2P49815 1807 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 EXOC1LA0A1B0GW35 172 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 ITGB1P05556 798 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 USP17L7P0C7H9 530 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 INTS6LQ5JSJ4 861 aaKnown RBP19.18■□□□□ 0.66
HOXC11-201ENST00000243082 VSTM1Q6UX27 236 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 CAPN12Q6ZSI9 719 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 BHLHA9Q7RTU4 235 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 METTL23Q86XA0 190 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 TDRPQ86YL5 185 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 RIBC1Q8N443 379 aaPredicted RBP19.18■□□□□ 0.66
HOXC11-201ENST00000243082 PYROXD1Q8WU10 500 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 RSPH1Q8WYR4 309 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 MAML1Q92585 1016 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 CREBZFQ9NS37 354 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 PIGVQ9NUD9 493 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 RCOR3Q9P2K3 495 aaPredicted RBP19.18■□□□□ 0.66
HOXC11-201ENST00000243082 MFHAS1Q9Y4C4 1052 aa19.18■□□□□ 0.66
HOXC11-201ENST00000243082 SYNJ2BP-COX16A0A087WUM0 186 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 C9IYK1 514 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 F8W810 466 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 CHADO15335 359 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 RNASELQ05823 741 aaKnown RBP19.17■□□□□ 0.66
HOXC11-201ENST00000243082 DEUP1Q05D60 604 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 NME3Q13232 169 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 CTU1Q7Z7A3 348 aaKnown RBP19.17■□□□□ 0.66
HOXC11-201ENST00000243082 CDKL3Q8IVW4 592 aaPredicted RBP19.17■□□□□ 0.66
HOXC11-201ENST00000243082 PDIK1LQ8N165 341 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 SLC43A3Q8NBI5 491 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 TSEN34Q9BSV6 310 aaKnown RBP19.17■□□□□ 0.66
HOXC11-201ENST00000243082 RAB6BQ9NRW1 208 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 INTS9Q9NV88 658 aaKnown RBP19.17■□□□□ 0.66
HOXC11-201ENST00000243082 TMLHEQ9NVH6 421 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 DTLQ9NZJ0 730 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 COX16Q9P0S2 106 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 TOMM70O94826 608 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 PAX3P23760 479 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 ARL4AP40617 200 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 MTM1Q13496 603 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 SLC45A4Q5BKX6 768 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 DCLRE1AQ6PJP8 1040 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 KCNT2Q6UVM3 1135 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 LRRTM3Q86VH5 581 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 FBXO36Q8NEA4 188 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 OR10T2Q8NGX3 314 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 TMEM209Q96SK2 561 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 DSEQ9UL01 958 aa19.17■□□□□ 0.66
HOXC11-201ENST00000243082 A0A1W2PQ45 241 aaPredicted RBP19.16■□□□□ 0.66
HOXC11-201ENST00000243082 A0A1W2PQY0 241 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 EBAG9O00559 213 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 YY1P25490 414 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 SSTR1P30872 391 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 CBLBQ13191 982 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 BBS9Q3SYG4 887 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 TADA2BQ86TJ2 420 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 SLC7A14Q8TBB6 771 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 RNF139Q8WU17 664 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 LINC01599Q8WXQ3 324 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 SUSD3Q96L08 255 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 QKIQ96PU8 341 aaKnown RBP eCLIP19.16■□□□□ 0.66
HOXC11-201ENST00000243082 FAM107BQ9H098 131 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 WDR6Q9NNW5 1121 aaKnown RBP19.16■□□□□ 0.66
HOXC11-201ENST00000243082 ARHGEF4Q9NR80 690 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 RABGEF1Q9UJ41 708 aa19.16■□□□□ 0.66
HOXC11-201ENST00000243082 TMEM120BA0PK00 339 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 CAPN9O14815 690 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 B4GALT3O60512 393 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 LTFP02788 710 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 INHAP05111 366 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 BDNFP23560 247 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 SYCP2LQ5T4T6 812 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 CCDC33Q8N5R6 958 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 ATP11CQ8NB49 1132 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 CCDC110Q8TBZ0 833 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 ADAM32Q8TC27 787 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 OLFM3Q96PB7 478 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 SLC9A7Q96T83 725 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 POC1B-GALNT4F8VUJ3 575 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 GCATO75600 419 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 DGKIO75912 1065 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 EOMESO95936 686 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 NCAM1P13591 858 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 MAGEA6P43360 314 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 MPP2Q14168 576 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 TMED2Q15363 201 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 EFHC2Q5JST6 749 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 OVOS1Q6IE37 1185 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms