RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 TRIM51Q9BSJ1 452 aa11.11□□□□□ -0.63
CDCA3-201ENST00000229265 APOL5Q9BWW9 433 aa11.11□□□□□ -0.63
CDCA3-201ENST00000229265 HEMGNQ9BXL5 484 aa11.11□□□□□ -0.63
CDCA3-201ENST00000229265 NEUROG2Q9H2A3 272 aa11.11□□□□□ -0.63
CDCA3-201ENST00000229265 NSUN3Q9H649 340 aaKnown RBP11.11□□□□□ -0.63
CDCA3-201ENST00000229265 ELAC1Q9H777 363 aaKnown RBP11.11□□□□□ -0.63
CDCA3-201ENST00000229265 NRDE2Q9H7Z3 1164 aa11.11□□□□□ -0.63
CDCA3-201ENST00000229265 PCDH9Q9HC56 1237 aa11.11□□□□□ -0.63
CDCA3-201ENST00000229265 TMEM161AQ9NX61 479 aa11.11□□□□□ -0.63
CDCA3-201ENST00000229265 CLDND1Q9NY35 253 aa11.11□□□□□ -0.63
CDCA3-201ENST00000229265 HMGXB4Q9UGU5 601 aa11.11□□□□□ -0.63
CDCA3-201ENST00000229265 ASIC3Q9UHC3 531 aa11.11□□□□□ -0.63
CDCA3-201ENST00000229265 ATP8A1Q9Y2Q0 1164 aa11.11□□□□□ -0.63
CDCA3-201ENST00000229265 PCDHB7Q9Y5E2 793 aa11.11□□□□□ -0.63
CDCA3-201ENST00000229265 C2orf16Q68DN1 1984 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 ARL5CA6NH57 179 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 M0QZQ0 153 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 SPTLC1O15269 473 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 PAPSS1O43252 624 aaPredicted RBP11.1□□□□□ -0.63
CDCA3-201ENST00000229265 TTC4O95801 387 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 AGTP01019 485 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 IVLP07476 585 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 ABHD2P08910 425 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 TYMPP19971 482 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 ACTN2P35609 894 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 MATKP42679 507 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 NRIP1P48552 1158 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 YWHAZP63104 245 aaKnown RBP11.1□□□□□ -0.63
CDCA3-201ENST00000229265 GRIK3Q13003 919 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 TUSC3Q13454 348 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 UAP1Q16222 522 aaPredicted RBP11.1□□□□□ -0.63
CDCA3-201ENST00000229265 SLC25A52Q3SY17 297 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 CEP85LQ5SZL2 805 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 PTCRAQ6ISU1 281 aaPredicted RBP11.1□□□□□ -0.63
CDCA3-201ENST00000229265 LLGL2Q6P1M3 1020 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 FAM183BPQ6ZVS7 135 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 CPNE8Q86YQ8 564 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 SCUBE3Q8IX30 993 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 THEM5Q8N1Q8 247 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 ZCCHC9Q8N567 271 aaKnown RBP11.1□□□□□ -0.63
CDCA3-201ENST00000229265 FAF2Q96CS3 445 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 PABPC5Q96DU9 382 aaKnown RBP11.1□□□□□ -0.63
CDCA3-201ENST00000229265 PGAP3Q96FM1 320 aaPredicted RBP11.1□□□□□ -0.63
CDCA3-201ENST00000229265 RNF157Q96PX1 679 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 OXCT2Q9BYC2 517 aaPredicted RBP11.1□□□□□ -0.63
CDCA3-201ENST00000229265 CSNK1G1Q9HCP0 422 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 CNGB3Q9NQW8 809 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDCA3-201ENST00000229265 KLK14Q9P0G3 267 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 FETUBQ9UGM5 382 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 SHOC2Q9UQ13 582 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 RAD54BQ9Y620 910 aa11.1□□□□□ -0.63
CDCA3-201ENST00000229265 VWA8A3KMH1 1905 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 TMEM189-UBE2V1I3L0A0 370 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 PPEF2O14830 753 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 ALOX15BO15296 676 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 RIPK2O43353 540 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 MBTPS2O43462 519 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 CST8O60676 142 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 PDGFRBP09619 1106 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 NPR3P17342 541 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 LMO2P25791 158 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 IL1R2P27930 398 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 SSTR3P32745 418 aaPredicted RBP11.09□□□□□ -0.63
CDCA3-201ENST00000229265 FLT3P36888 993 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 HCAR3P49019 387 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 SLC11A1P49279 550 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 SOX4Q06945 474 aaPredicted RBP11.09□□□□□ -0.63
CDCA3-201ENST00000229265 SNX1Q13596 522 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 SLC29A2Q14542 456 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 STAT4Q14765 748 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 DPYSL2Q16555 572 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 CCDC142Q17RM4 750 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 ZC3H12AQ5D1E8 599 aaKnown RBP11.09□□□□□ -0.63
CDCA3-201ENST00000229265 TNFAIP8L3Q5GJ75 292 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 RAB41Q5JT25 222 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 PLPP4Q5VZY2 271 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 SLC9A4Q6AI14 798 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 FAM171BQ6P995 826 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 SYCE2Q6PIF2 218 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 KCNT2Q6UVM3 1135 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 DSTYKQ6XUX3 929 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 PPP1R21Q6ZMI0 780 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 LEKR1Q6ZMV7 388 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 EP400NLQ6ZTU2 488 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 BNIPLQ7Z465 357 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 SLC39A11Q8N1S5 342 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 RIBC1Q8N443 379 aaPredicted RBP11.09□□□□□ -0.63
CDCA3-201ENST00000229265 MYCBPAPQ8TBZ2 947 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 RSAD2Q8WXG1 361 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 P3H4Q92791 437 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 RTP4Q96DX8 246 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 CCDC114Q96M63 670 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 SAMD11Q96NU1 681 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 FERMT1Q9BQL6 677 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 PAAF1Q9BRP4 392 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 APOL6Q9BWW8 343 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 CAPS2Q9BXY5 557 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 TRIM31Q9BZY9 425 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 SMOC2Q9H3U7 446 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms