RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 TRDMT1O14717 391 aaKnown RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 CHADO15335 359 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 DKC1O60832 514 aaKnown RBP eCLIP10□□□□□ -0.81
TUBB1-201ENST00000217133 SNNO75324 88 aaPredicted RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 LDHAP00338 332 aaKnown RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 ICAM1P05362 532 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 HNRNPCP07910 306 aaKnown RBP eCLIP10□□□□□ -0.81
TUBB1-201ENST00000217133 IMPDH2P12268 514 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 CRHR1P34998 444 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 TFDP2Q14188 446 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 KRT81Q14533 505 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 TAF5Q15542 800 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 DBN1Q16643 649 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 NADK2Q4G0N4 442 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 ZBTB41Q5SVQ8 909 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 RARS2Q5T160 578 aaKnown RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 SLFN12LQ6IEE8 588 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 FBXL19Q6PCT2 694 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 TMC7Q7Z402 723 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 AGBL3Q8NEM8 1001 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 PRPF31Q8WWY3 499 aaKnown RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 APBB2Q92870 758 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 RMDN3Q96TC7 470 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 TARS2Q9BW92 718 aaKnown RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 CYP26B1Q9NR63 512 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 PACSIN3Q9UKS6 424 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 SYNPO2Q9UMS6 1093 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 SH3BP1Q9Y3L3 701 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 FOCADQ5VW36 1801 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 ITM2AO43736 263 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 MAP3K6O95382 1288 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 CSH1P0DML2 217 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 CSH2P0DML3 217 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 HPCAP84074 193 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 MMRN1Q13201 1228 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 KCNJ11Q14654 390 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 ARHGEF16Q5VV41 709 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 CASC4Q6P4E1 433 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 KLHDC10Q6PID8 442 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 SYTL5Q8TDW5 730 aaPredicted RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 ACTRT2Q8TDY3 377 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 SNRNP27Q8WVK2 155 aaKnown RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 LZICQ8WZA0 190 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 DCUN1D1Q96GG9 259 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 CLMNQ96JQ2 1002 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 SIKE1Q9BRV8 207 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 TRIM56Q9BRZ2 755 aaKnown RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 SUDS3Q9H7L9 328 aaPredicted RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 RAVER2Q9HCJ3 691 aaKnown RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 HERC5Q9UII4 1024 aaKnown RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 ARHGAP26Q9UNA1 814 aa10□□□□□ -0.81
TUBB1-201ENST00000217133 GREB1LQ9C091 1923 aaPredicted RBP10□□□□□ -0.81
TUBB1-201ENST00000217133 SRGAP2CP0DJJ0 459 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 SRGAP2BP0DMP2 458 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 TPP2P29144 1249 aaPredicted RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 MIPP30301 263 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 SERPINB9P50453 376 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 ADARP55265 1226 aaKnown RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 TLR1Q15399 786 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 TAS1R3Q7RTX0 852 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 PQLC1Q8N2U9 271 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 TMEM143Q96AN5 459 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 ZFRQ96KR1 1074 aaKnown RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 PRICKLE1Q96MT3 831 aaPredicted RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 PRPF18Q99633 342 aaKnown RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 FRMD8Q9BZ67 464 aaPredicted RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 EPB41L1Q9H4G0 881 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 FAM96AQ9H5X1 160 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 PNPLA8Q9NP80 782 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 DCXO43602 365 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 EIF4BP23588 611 aaKnown RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 MYL6P60660 151 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 RPS6P62753 249 aaKnown RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 CLDN10P78369 228 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 PTPN20Q4JDL3 420 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 N4BP2L1Q5TBK1 243 aaPredicted RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 DENND1BQ6P3S1 775 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 TRMT10BQ6PF06 316 aaKnown RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 FBXW8Q8N3Y1 598 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 MRPL1Q9BYD6 325 aaKnown RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 NIF3L1Q9GZT8 377 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 POPDC2Q9HBU9 364 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 SMYD2Q9NRG4 433 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 PNPOQ9NVS9 261 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 ARHGAP28Q9P2N2 729 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 THEGQ9P2T0 379 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 TJP2Q9UDY2 1190 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 HACL1Q9UJ83 578 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 USP18Q9UMW8 372 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 CNTN6Q9UQ52 1028 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 CENPFP49454 3210 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 TCRBV5S1A1TA0A578 114 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 NPM3O75607 178 aaKnown RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 TNFAIP8O95379 198 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 CST3P01034 146 aaPredicted RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 TFAP2AP05549 437 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 HDAC4P56524 1084 aa9.99□□□□□ -0.81
TUBB1-201ENST00000217133 YWHAEP62258 255 aaKnown RBP9.99□□□□□ -0.81
TUBB1-201ENST00000217133 FSCBQ5H9T9 825 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms