RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Q80WR5 230 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ndufaf7Q9CWG8 436 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ing2Q9ESK4 281 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ltbp1Q8CG19 1712 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Olfr611K7N609 323 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Olfr612L7N462 323 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Scg3P47867 471 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Mc4rP56450 332 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 CcnjlQ5SRT8 387 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Trpm4Q7TN37 1213 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Chn2Q80XD1 332 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Q8R1Y2 203 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Olfr784Q8VFZ9 319 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Fubp1Q91WJ8 651 aaKnown RBP13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Hdhd5Q91WM2 419 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Mrps9Q9D7N3 390 aaKnown RBP13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Cul3Q9JLV5 768 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Plod1Q9R0E2 728 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Gys1Q9Z1E4 738 aaKnown RBP13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Pck1Q9Z2V4 622 aa13.66□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Gm4907B1AXB9 411 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 TroapB7ZNG4 668 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Adgrf2E9Q4J9 644 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 AfpP02772 605 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 PgfP49764 158 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Vps51Q3UVL4 782 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Plk4Q64702 925 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Oas1dQ8VI95 361 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 4933428M09RikQ9D3X3 192 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Myo7aP97479 2215 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Gm16430A6X8J1 155 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Slfn8B1ARD8 910 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Prdm15E9Q8T2 1174 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Tnfrsf11bO08712 401 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 ClgnP52194 611 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ptcd3Q14C51 685 aaKnown RBP13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Cln3Q61124 438 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 PostnQ62009 838 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Mbtd1Q6P5G3 631 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Armc12Q80X86 340 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Pcdhgb1Q91XX8 918 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Tbrg4Q91YM4 630 aaKnown RBP13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Unc45aQ99KD5 944 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Slxl1Q9D515 155 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Greb1lB9EJV3 1913 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Gm10801F7C7Q0 168 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Lamp1P11438 406 aaKnown RBP13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Fgfr1P16092 822 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Bmp2P21274 394 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Gjb3P28231 270 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Sdr16c6Q05A13 316 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Fscn1Q61553 493 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Map3k7Q62073 579 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Sh3rf1Q69ZI1 892 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Sez6lQ6P1D5 963 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Hmgb4Q6P8W9 181 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Znf879Q8BI99 563 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ints6lQ8BND4 861 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Q8CIL4 281 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Trip10Q8CJ53 603 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Trpd52l3Q9CQ14 231 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 ParvbQ9ES46 365 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Bmp15Q9Z0L4 392 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ltn1Q6A009 1767 aa13.65□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Rabgap1lA6H6A9 815 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Maml3D4QGC2 1135 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Vmn2r104E9Q2J5 860 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Nkx1-1G3UXB3 402 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 C1qbpO35658 278 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 PolgP54099 1218 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Msx2Q03358 267 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Slc24a2Q14BI1 711 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Arl5cQ6P068 179 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Akap7Q7TN79 314 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ankzf1Q80UU1 748 aaKnown RBP13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Mapk15Q80Y86 549 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Clip4Q8CI96 704 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Vps39Q8R5L3 886 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ndufaf1Q9CWX2 328 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Utp11Q9CZJ1 253 aaKnown RBP13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Stx12Q9ER00 274 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 IvdQ9JHI5 424 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Gm10250G3X9L6 160 aaKnown RBP13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Lmo2P25801 158 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Cdk16Q04735 496 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Slc17a7Q3TXX4 560 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Trmt10cQ3UFY8 414 aaKnown RBP13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 TbcdQ8BYA0 1196 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Sugp1Q8CH02 643 aaKnown RBP13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Fbxw7Q8VBV4 629 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Uroc1Q8VC12 676 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Pcdha2Q91Y17 948 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Gstt4Q9D4P7 240 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Fam227bQ9D518 532 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Atp5hQ9DCX2 161 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 DpysQ9EQF5 519 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Clec4aQ9QZ15 238 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Itgb1bp2Q9R000 350 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Mbd1Q9Z2E2 636 aa13.64□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Supt3B0QZW4 406 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms