RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Ppargc1aO70343 797 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Cxcl12P40224 93 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Lrrc47Q505F5 581 aaKnown RBP10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Slc5a10Q5SWY8 596 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Mef2dQ63943 514 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Cacna2d2Q6PHS9 1154 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Paqr9Q6TCG2 375 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Sass6Q80UK7 654 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Snip1Q8BIZ6 383 aaKnown RBP10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Rps6kc1Q8BLK9 1056 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Actl9Q8CG27 415 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Dlg2Q91XM9 852 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Fads1Q920L1 447 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Umodl1Q5DID3 1319 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ces1bD3Z5G7 567 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Gm5926E9PWJ8 236 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Flt3lgP49772 232 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Cdo1P60334 200 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Arl4aP61213 200 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 TCAIMQ66JZ4 499 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Mon1aQ6PDG8 556 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Armc12Q80X86 340 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Clec2eQ80XD9 204 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 RbakQ8BQC8 711 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 4931406P16RikQ8C5X1 1059 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Trim61Q8JZK6 461 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Rnf112Q96DY5 654 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 P01648 108 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Myl4P09541 193 aaKnown RBP10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ccl5P30882 91 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Agbl1Q09M05 972 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Frem3Q5H8B9 2123 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Grik1Q60934 836 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Anks6Q6GQX6 883 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Olfr1198Q7TR12 308 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Lrsam1Q80ZI6 727 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Nlrp4aQ8BU40 982 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Slc41a2Q8BYR8 573 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Svs3bQ8BZH8 265 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Trub1Q8C0D0 338 aaKnown RBP10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 OafQ8QZR4 282 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Uhrf1Q8VDF2 782 aaKnown RBP10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Synpo2Q91YE8 1087 aaKnown RBP10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Krt20Q9D312 431 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Xpo7Q9EPK7 1087 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 PnkpQ9JLV6 522 aaKnown RBP10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Rhox3fA2ANE1 215 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Fibcd1A2AV25 459 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Daw1D3Z7A5 415 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 E230025N22RikG5E8S3 482 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Cd160O88875 185 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 P01631 113 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Epha3P29319 983 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Slc38a5Q3U1J0 479 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Hsph1Q61699 858 aaKnown RBP10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Eif2b4Q61749 524 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Foxo6Q70KY4 559 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Olfr698Q7TRN4 311 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Q8BGD0 127 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Slc38a9Q8BGD6 560 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Tmx4Q8C0L0 335 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Sept10Q8C650 452 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 H6pdQ8CFX1 789 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Spata2Q8K004 515 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Lmcd1Q8VEE1 365 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Scube2Q9JJS0 997 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Igkv5-45A0A0B4J1J1 115 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Aldoart1A6ZI46 419 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Zfp850J3QPC5 689 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 SrgnP13609 152 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ceacam5Q3UKK2 947 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Slc6a4Q60857 630 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 E2f5Q61502 335 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Tspyl5Q69ZB3 406 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Map3k11Q80XI6 850 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Epb41l5Q8BGS1 731 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Q8BHN7 327 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 4921504E06RikQ8CET2 560 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Tbc1d14Q8CGA2 694 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Rab30Q923S9 203 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Kdelr1Q99JH8 212 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Marc1Q9CW42 340 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Plin4O88492 1403 aa10.31□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Nlgn4lB0F2B4 945 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Vmn2r72D3Z4N8 856 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Gm5689F6Y2A6 97 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ptpn9O35239 593 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Cldn2O88552 230 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Zfy1P10925 782 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 CtswP56203 371 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Gpr19Q61121 415 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ptpn14Q62130 1189 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Gpbp1l1Q6NZP2 473 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ccdc25Q78PG9 208 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Q80Y73 168 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Kctd12bQ8C7J6 292 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Nol6Q8R5K4 1152 aaKnown RBP10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Caskin2Q8VHK1 1201 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 MtrexQ9CZU3 1040 aaKnown RBP10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Syap1Q9D5V6 365 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms