RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 KhkP97328 298 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gjb4Q02738 266 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gch1Q05915 241 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Eif1adQ3THJ3 170 aaKnown RBP9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tex52Q3TTI8 308 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ckmt2Q6P8J7 419 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cdk5rap1Q8BTW8 588 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 LnpepQ8C129 1025 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 CnstQ8CBC4 711 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ero1bQ8R2E9 467 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mrm1Q99J25 320 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Emc3Q99KI3 261 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Zbtb8aQ9CWH1 434 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 3100002H09RikQ9CXW6 140 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Qrsl1Q9CZN8 525 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 EqtnQ9D9V2 337 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Aurkaip1Q9DCJ7 200 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 GabrqQ9JLF1 638 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Akt3Q9WUA6 479 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Nfs1Q9Z1J3 459 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cacna2d3Q9Z1L5 1091 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 SktA2AQ25 1946 aaKnown RBP9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Prdm14E9Q3T6 561 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cdh16O88338 830 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dnmt3bO88509 859 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 H2-EaP01904 255 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 TrhrP21761 393 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 TtlP38585 377 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 MpripP97434 1024 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 MertkQ60805 994 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tgoln2Q62314 363 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mvb12bQ6KAU4 317 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Acap2Q6ZQK5 770 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ppp1r10Q80W00 888 aaKnown RBP9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Entpd3Q8BFW6 529 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Arl14epQ8BIX3 276 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tspan9Q8BJU2 239 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cndp1Q8BUG2 492 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Usp38Q8BW70 1042 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Zdhhc3Q8R173 299 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Rpap2Q8VC34 614 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Prss42Q8VIF2 335 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 LipfQ9CPP7 395 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Lpcat2bQ9D5U0 516 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mrpl4Q9DCU6 294 aaKnown RBP9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Trim54Q9ERP3 366 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Kank3Q9Z1P7 791 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Rnf212bD3Z423 297 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cyp4a31F8WGU9 509 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Olfr1331K7N684 317 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 IkbkbO88351 757 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Grm8P47743 908 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 SykP48025 629 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Hps5P59438 1126 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 InhbaQ04998 424 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tmem120bQ3TA38 339 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cep295nlQ497N6 533 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dennd5aQ6PAL8 1287 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Olfr1333Q7TQV7 317 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mfn2Q80U63 757 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ddx10Q80Y44 875 aaKnown RBP9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cabs1Q8C633 391 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Lin9Q8C735 542 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Zfp202Q8C879 641 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mterf1aQ8CHZ9 379 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ipo11Q8K2V6 975 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Etv3Q8R4Z4 513 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 ToporslQ9D2F8 683 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Rasgef1cQ9D300 466 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Sh2d3cQ9QZS8 854 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Chek2Q9Z265 546 aa9.41□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pm20d2A3KG59 431 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ces1aE9PYP1 563 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ap3d1O54774 1199 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Scg5P12961 212 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 AdssP46664 456 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Actn4P57780 912 aaKnown RBP9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dnal1Q05A62 190 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Smu1Q3UKJ7 513 aaKnown RBP9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Hdgfl2Q3UMU9 669 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ccna1Q61456 421 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dmc1Q61880 340 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 SrmQ64674 302 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Hdac10Q6P3E7 666 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Scgb2b2Q6UGQ3 114 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 DgkzQ80UP3 929 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Teddm1aQ810U2 305 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Clvs2Q8BG92 327 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Nup107Q8BH74 926 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ccdc184Q8BMK5 191 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Prkd2Q8BZ03 875 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Nadk2Q8C5H8 452 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 ClmnQ8C5W0 1052 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Fbxl13Q8CDU4 790 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Stoml1Q8CI66 399 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tcf25Q8R3L2 676 aaKnown RBP9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tti1Q91V83 1085 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gorasp2Q99JX3 451 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cotl1Q9CQI6 142 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Armc8Q9DBR3 673 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms