RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Sema5aQ62217 1077 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 HpseQ6YGZ1 535 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tdpoz3Q717B4 365 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 CcnyQ8BGU5 341 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 D130040H23RikQ8BII3 405 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Arhgap24Q8C4V1 747 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cfap36Q8C6E0 343 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ces2aQ8QZR3 558 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Angel1Q8VCU0 667 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Rprd1aQ8VDS4 312 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 FcrlaQ920A9 352 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ska2Q9CR46 120 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Trmt10bQ9D075 318 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Aldh1a3Q9JHW9 512 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Rfx5Q9JL61 658 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Grb14Q9JLM9 538 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Unc13cQ8K0T7 2210 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 AlpiF8VPQ6 554 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tpp1O89023 562 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Rad23aP54726 363 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cdh9P70407 786 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cyp2j11Q3UNV2 504 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Zfyve28Q6ZPK7 905 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 R3hdm2Q80TM6 1044 aaKnown RBP7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Trpa1Q8BLA8 1125 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Mat1aQ91X83 396 aaKnown RBP7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 QpctQ9CYK2 362 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Nop56Q9D6Z1 580 aaKnown RBP7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 PirQ9D711 290 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ddx24Q9ESV0 857 aaKnown RBP7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Extl1Q9JKV7 669 aa7.16□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ccdc170D3YXL0 722 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Impa1O55023 277 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 AdkP55264 361 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Usp46P62069 366 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tab3Q571K4 716 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tmem232Q5K6N0 675 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ttf2Q5NC05 1138 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Creb3Q61817 404 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Sema3cQ62181 751 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ckap2lQ7TS74 745 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ppp1r15bQ8BFW3 697 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ccz1Q8C1Y8 480 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tp53inp2Q8CFU8 221 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Lrrc14Q8VC16 493 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ccdc92Q8VDN4 314 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Golga1Q9CW79 758 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Zcchc8Q9CYA6 709 aaKnown RBP7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Fam217aQ9D9W6 419 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Znf654Q9DAU9 571 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Mrpl4Q9DCU6 294 aaKnown RBP7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Uchl3Q9JKB1 230 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cntnap5aQ0V8T9 1304 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Taf1Q80UV9 1891 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 SpaarA0A1B0GSZ0 75 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gm28043E0CXC2 719 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gm8994E9PV04 411 aaKnown RBP7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ebf3O08791 596 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 RaxO35602 342 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 TertO70372 1122 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Casp8O89110 480 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ifnb1P01575 182 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tp53P02340 387 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Defa-rs12P50716 91 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gp1bbP56400 206 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 YwhazP63101 245 aaKnown RBP7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Fgf13P70377 245 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Nhlh1Q02576 133 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 IqcmQ149I8 489 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Muc3aQ3U5A2 218 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 TCAIMQ66JZ4 499 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 KaznQ69ZS8 779 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Trappc6aQ78XR0 159 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Olfr1080Q7TR67 313 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Olfr26Q7TRB7 308 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tspan18Q80WR1 248 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Fbxo46Q8BG80 603 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Anapc5Q8BTZ4 740 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Abhd8Q8R0P8 439 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Zkscan3Q91VW9 553 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Nuf2Q99P69 463 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Lpin3Q99PI4 848 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Sgf29Q9DA08 293 aaKnown RBP7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Olfr933Q9EQA0 308 aa7.15□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Glipr1l3A0A1W2P7V2 236 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Osbpl7A2A716 963 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Prrg1A2BFE8 218 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Arhgap42B2RQE8 841 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sec24cG3X972 1096 aaKnown RBP7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mdh1P14152 334 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mxi1P50540 228 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cdo1P60334 200 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cage1Q5IR70 849 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 PkdccQ5RJI4 492 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Dnajc16Q80TN4 772 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc51bQ80WK2 128 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ppp1r12bQ8BG95 976 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Atat1Q8K341 421 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Unc45aQ99KD5 944 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Txndc9Q9CQ79 226 aa7.15□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms