RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 CidecP56198 239 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Timm13P62075 95 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Gm5168Q4KL04 211 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Tmem45aQ60774 273 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Cypt4Q6P925 153 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ccdc117Q6PB51 277 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 AtripQ8BMG1 785 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Plekhs1Q8BW88 474 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Fam193aQ8CGI1 1231 aaKnown RBP9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Smtnl2Q8CI12 456 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ubxn6Q99PL6 442 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Q9D1F3 157 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Prl2a1Q9JHK0 228 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Fzd2Q9JIP6 570 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Htra2Q9JIY5 458 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Pla2g2fQ9QZT4 168 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Pacsin2Q9WVE8 486 aaKnown RBP9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Rpl9-ps6A0A140T8T4 192 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Lrrc74aA0A1Y7VMD6 494 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ccdc144bE9PVZ3 520 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 F6Y6L6 278 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Soat2O88908 525 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 PrlP06879 226 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Tcf3P15806 651 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Rpl9P51410 192 aaKnown RBP9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Gabrr2P56476 465 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Nfe2l2Q60795 597 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Msi1Q61474 362 aaKnown RBP9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ssr4Q62186 172 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Krba1Q6NXZ1 1043 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Snd1Q78PY7 910 aaKnown RBP9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 AdalQ80SY6 360 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Map3k11Q80XI6 850 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Efcab14Q8BGQ6 484 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Enpp4Q8BTJ4 456 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Leng8Q8CBY3 785 aaKnown RBP9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Cacnb2Q8CC27 655 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ccdc28aQ8CEI3 192 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Arhgap18Q8K0Q5 663 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ctage5Q8R311 779 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Nol6Q8R5K4 1152 aaKnown RBP9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Usp3Q91W36 520 aaKnown RBP9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 AjubaQ91XC0 547 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Dlg2Q91XM9 852 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Stx17Q9D0I4 301 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 3830403N18RikQ9D6C3 208 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Nkx2-4Q9EQM3 354 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ddx24Q9ESV0 857 aaKnown RBP9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Scgb2b20Q9JI02 112 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 PrebQ9WUQ2 417 aa9.22□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Arhgap42B2RQE8 841 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 4930558K02RikE0CXC6 182 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Vmn2r11E9Q4X4 861 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 NoctO35710 429 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Hk1P17710 974 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Capza3P70190 299 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Cyp2c65Q148B1 490 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Cyb5r4Q3TDX8 528 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Elf3Q3UPW2 391 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Slc6a4Q60857 630 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Arnt2Q61324 712 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Irak1Q62406 710 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Fcrl5Q68SN8 596 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Sec23ipQ6NZC7 998 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Mib1Q80SY4 1006 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Baiap3Q80TT2 1134 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Tusc3Q8BTV1 347 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Taf5Q8C092 801 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Sh3rf3Q8C120 878 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ccdc65Q8VHI7 493 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Pomgnt1Q91X88 660 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Atg13Q91YI1 516 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Srgap2Q91Z67 1071 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Sytl2Q99N50 950 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Pus10Q9D3U0 527 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 DmgdhQ9DBT9 869 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Syde1Q9DBZ9 737 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 PolhQ9JJN0 694 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Tubd1Q9R1K7 455 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Trpc2Q9R244 1172 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Pcsk5Q04592 1877 aa9.21□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Tnrc18Q80WC3 2878 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Gm28919A0A087WP35 240 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Igkv16-104A0A0B4J1I1 116 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Zfy2P20662 777 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Lmnb2P21619 596 aaKnown RBP9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Ccnb1P24860 430 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 AxlQ00993 888 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Runx2Q08775 607 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 TceancQ3US16 359 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Srbd1Q497V5 1015 aaKnown RBP9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Spire1Q52KF3 598 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Znf185Q62394 352 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Kansl1Q80TG1 1036 aaKnown RBP9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Stau2Q8CJ67 570 aaKnown RBP9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Mtss1Q8R1S4 759 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Vmn1r64Q8R2B8 320 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Cox18Q8VC74 331 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Pcdhb18Q91Y02 792 aa9.21□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Abcg3Q99P81 650 aa9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms