RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Pcsk1nQ9QXV0 258 aa23.77■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Scn5aQ9JJV9 2019 aa23.77■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Rtl9Q32KG4 1339 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Ssxb9A2BI93 185 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Gm3336J3QMQ6 198 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 PrlP06879 226 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Mc4rP56450 332 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Col6a1Q04857 1025 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 HnrnpdQ60668 355 aaKnown RBP23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Foxo6Q70KY4 559 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Rps6ka6Q7TPS0 764 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 PdhxQ8BKZ9 501 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 McmbpQ8R3C0 642 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Ppa2Q91VM9 330 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Ddx50Q99MJ9 734 aaKnown RBP23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Dlgap1Q9D415 992 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 PlekQ9JHK5 350 aaKnown RBP23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Irx5Q9JKQ4 484 aa23.76■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Apol7bB1AQP7 369 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Hes2O54792 157 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Per2O54943 1257 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Scrg1O88745 98 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Wfs1P56695 890 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Apol7eQ3UZ24 369 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Trub1Q8C0D0 338 aaKnown RBP23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Agbl3Q8CDP0 1006 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Prpf39Q8K2Z2 665 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Kdelr1Q99JH8 212 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Raver1Q9CW46 748 aaKnown RBP23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Pak1ip1Q9DCE5 382 aaKnown RBP23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Cpb2Q9JHH6 422 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Gm5483B2RV77 97 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Serpinb9O08797 374 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Fgf15O35622 218 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 RxrbP28704 520 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Shox2P70390 331 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 9130409I23RikQ3TS87 320 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Ksr1Q61097 873 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Fnip1Q68FD7 1165 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Pak4Q8BTW9 593 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Vps37cQ8R105 352 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Ppp2r2dQ925E7 453 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Mcur1Q9CXD6 340 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 1110002E22RikE0CYV9 1786 aa23.75■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Igkv5-45A0A0B4J1J1 115 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Tmem240B2RWJ3 173 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Pcsk6F6XJP7 959 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 P01648 108 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Slc11a2P49282 568 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Hsd17b2P51658 381 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Ltbp3Q61810 1268 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Enpp4Q8BTJ4 456 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Hmgcll1Q8JZS7 343 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Angel1Q8VCU0 667 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 1700109H08RikQ9D9C0 210 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 LactbQ9EP89 551 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Padi3Q9Z184 664 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Mapk13Q9Z1B7 366 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Hsf3D0VYS2 492 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 FancfE9Q5Z5 343 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Dsg3O35902 993 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 TertO70372 1122 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Hoxb8P09632 243 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Usp46P62069 366 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Tmem45aQ60774 273 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Fcrl5Q68SN8 596 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Clec2eQ80XD9 204 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Als2cr12Q8BVM7 383 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Slco2b1Q8BXB6 683 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Tmem161aQ8VCA6 480 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Olfr345Q8VGK4 311 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Q922M7 232 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Pramel1Q99MW3 458 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Tsnaxip1Q99P25 704 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Caln1Q9JJG7 219 aa23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Edf1Q9JMG1 148 aaKnown RBP23.74■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Slc23a4A0A0J9YUX7 615 aa23.73■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Gm5926E9PWJ8 236 aa23.73■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Nek2O35942 443 aa23.73■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Cd300ldQ8VCH2 221 aa23.73■■□□□ 1.39
Upf3a-201ENSMUST00000043767 4930550L24RikQ99PA7 320 aa23.73■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Gemin2Q9CQQ4 269 aa23.73■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Gde1Q9JL56 331 aa23.73■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Gm6588E9Q3K0 461 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 PdgfraP26618 1089 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Itga11P61622 1188 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Frg1P97376 258 aaKnown RBP23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Myadml2Q08AU7 307 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 ZufspQ3T9Z9 577 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Grm6Q5NCH9 871 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Myo6Q64331 1265 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Colgalt2Q6NVG7 625 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Smoc2Q8CD91 447 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Fam151aQ8QZW3 608 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Akr1c14Q91WT7 323 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Fkbp6Q91XW8 327 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Pcdha10Q91Y20 946 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 SncaipQ99ME3 962 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Sept5Q9Z2Q6 369 aa23.72■■□□□ 1.39
Upf3a-201ENSMUST00000043767 Gdap1O88741 358 aa23.72■■□□□ 1.39
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms