RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Gm45233A0A0N4SVE0 221 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 BpgmP15327 259 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 LynP25911 512 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Mthfd1lQ3V3R1 977 aaKnown RBP11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gdpd5Q640M6 607 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Moxd2Q7TT41 619 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Atp6v0d2Q80SY3 350 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Fbxl5Q8C2S5 690 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Trim61Q8JZK6 461 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Snapc1Q8K0S9 389 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Cd248Q91V98 765 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Paip2bQ91W45 136 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Serpinb3bQ9D1Q5 387 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 EtfbQ9DCW4 255 aaKnown RBP11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ice1E9Q286 2241 aaKnown RBP11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm15448F6PZL4 682 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Hspa4lP48722 838 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 SnrpfP62307 86 aaKnown RBP11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Cd36Q08857 472 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Foxred2Q3USW5 665 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Lrrc8eQ66JT1 795 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Siglec10Q80ZE3 688 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Haus8Q99L00 373 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Rdh14Q9ERI6 334 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Nupr1Q9WTK0 80 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Akt3Q9WUA6 479 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm4907B1AXB9 411 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Slc1a6O35544 561 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Krt6aP50446 553 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Slc38a5Q3U1J0 479 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Prm3Q62100 101 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 ClmnQ8C5W0 1052 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Bhlhe22Q8C6A8 355 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Wdr98Q8VC42 657 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Pcdh18Q8VHR0 1134 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Arpc2Q9CVB6 300 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 TfebQ9R210 475 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 1700031M16RikA0A087WSH0 82 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 InhbeO08717 350 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Hcn4O70507 1186 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PpargP37238 505 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Scg3P47867 471 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ccna2P51943 422 aaKnown RBP11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Rhox5P52651 210 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Adamts18Q4VC17 1219 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Dusp16Q6PCP3 660 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Nsl1Q8K305 281 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Fam151aQ8QZW3 608 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tmem82Q8R115 356 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Homer3Q99JP6 356 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Morf4l2Q9R0Q4 288 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tle2Q9WVB2 767 aa11.66□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Map7d3A2AEY4 876 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Zscan4bE9Q3G0 505 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 RgnQ64374 299 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 GnasQ6R0H7 1133 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Actr5Q80US4 605 aaKnown RBP11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 TdrpQ8C5P7 182 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Trim32Q8CH72 655 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Rin1Q921Q7 763 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Klhl35Q9CZ49 574 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Clvs1Q9D4C9 354 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 DpysQ9EQF5 519 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Akap11E9Q777 1895 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Rhbdl2A2AGA4 302 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 RnaselQ05921 735 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Lrrc47Q505F5 581 aaKnown RBP11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Wbp4Q61048 376 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Prr33Q8C494 260 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Agbl2Q8CDK2 862 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Glra3Q91XP5 464 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Wdr83Q9DAJ4 315 aaKnown RBP11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Vwa7Q9JHA8 891 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Mpp5Q9JLB2 675 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Mroh7A2AVR2 1279 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tnfrsf11bO08712 401 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Pde4aO89084 844 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 NppbP40753 121 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 St3gal1P54751 337 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gja5Q01231 358 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Mfhas1Q3V1N1 1048 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm5431Q5NCB3 844 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 TbcdQ8BYA0 1196 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Trappc12Q8K2L8 797 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Toe1Q9D2E2 511 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Efhc1Q9D9T8 648 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Slc15a2Q9ES07 729 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 ParvbQ9ES46 365 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PignQ9R1S3 931 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Duox1A2AQ92 1551 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 A0A1Y7VP24 259 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tubb1A2AQ07 451 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 MipP51180 263 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 YwhazP63101 245 aaKnown RBP11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Marveld2Q3UZP0 555 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Dhx32Q8BZS9 744 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Plekhg6Q8R0J1 787 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Abtb1Q99LJ2 478 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 TtpalQ9D3D0 343 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Akr1c12Q9JLI0 323 aa11.65□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms