RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.35□□□□□ -0.119e-8■■■□□ 19.1
PHGDH-233ENST00000642021 SIRPGQ9P1W8 387 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 PPARGC1AQ9UBK2 798 aaKnown RBP14.35□□□□□ -0.11
PHGDH-233ENST00000642021 NR2E3Q9Y5X4 410 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 TFE3P19532 575 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-233ENST00000642021 RPS12P25398 132 aaKnown RBP14.34□□□□□ -0.11
PHGDH-233ENST00000642021 KLC1Q07866 573 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 TEX44Q53QW1 395 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 EFCAB12Q6NXP0 572 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 TMEM154Q6P9G4 183 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 ZCCHC23Q6ZST2 131 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 KBTBD2Q8IY47 623 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 PDCD7Q8N8D1 485 aaKnown RBP14.34□□□□□ -0.11
PHGDH-233ENST00000642021 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
PHGDH-233ENST00000642021 RTP4Q96DX8 246 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 FAM167AQ96KS9 214 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 C7orf26Q96N11 449 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 PCDH18Q9HCL0 1135 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 NGRNQ9NPE2 291 aaKnown RBP14.34□□□□□ -0.11
PHGDH-233ENST00000642021 KCNK4Q9NYG8 393 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 PIM2Q9P1W9 311 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 ZNF180Q9UJW8 692 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 TSPAN16Q9UKR8 245 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 TNFSF13BQ9Y275 285 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 SOCS7O14512 581 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 ZBED1O96006 694 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 APOEP02649 317 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 PGK2P07205 417 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 VDRP11473 427 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 AQP5P55064 265 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 KDSRQ06136 332 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 WDR78Q5VTH9 848 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 LRRC74BQ6ZQY2 392 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 NUDCD3Q8IVD9 361 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 UNC5BQ8IZJ1 945 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 SIGLEC10Q96LC7 697 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 EBF4Q9BQW3 602 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 KRT82Q9NSB4 513 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 PCMTD2Q9NV79 361 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 STX18Q9P2W9 335 aaKnown RBP14.34□□□□□ -0.11
PHGDH-233ENST00000642021 PPME1Q9Y570 386 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 TGFB3P10600 412 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 IRX4P78413 519 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 MRPS35P82673 323 aaKnown RBP14.34□□□□□ -0.11
PHGDH-233ENST00000642021 SLC10A2Q12908 348 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-233ENST00000642021 CBLBQ13191 982 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 SLC10A6Q3KNW5 377 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 FAM91A1Q658Y4 838 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 PMF1Q6P1K2 205 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 SHKBP1Q8TBC3 707 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 HPDLQ96IR7 371 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 CPB2Q96IY4 423 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 FAM161BQ96MY7 647 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 MMADHCQ9H3L0 296 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-233ENST00000642021 IFT122Q9HBG6 1241 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 MAD1L1Q9Y6D9 718 aa14.34□□□□□ -0.11
PHGDH-233ENST00000642021 I3L4J1 428 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 TRDMT1O14717 391 aaKnown RBP14.33□□□□□ -0.12
PHGDH-233ENST00000642021 APOL1O14791 398 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 IL18RAPO95256 599 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 CCNFP41002 786 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 RCN2Q14257 317 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 PPP6R3Q5H9R7 873 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-233ENST00000642021 ILDR2Q71H61 639 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 SCUBE3Q8IX30 993 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 ADGRF2Q8IZF7 708 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 NDUFAF2Q8N183 169 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 FAM172AQ8WUF8 416 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 SNRNP25Q9BV90 132 aaKnown RBP14.33□□□□□ -0.12
PHGDH-233ENST00000642021 GBA2Q9HCG7 927 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-233ENST00000642021 BCLAF3A2AJT9 711 aaKnown RBP14.33□□□□□ -0.12
PHGDH-233ENST00000642021 EME2A4GXA9 379 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-233ENST00000642021 NOP56O00567 594 aaKnown RBP14.33□□□□□ -0.12
PHGDH-233ENST00000642021 LGR5O75473 907 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 GABBR2O75899 941 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 ATXN1P54253 815 aaKnown RBP14.33□□□□□ -0.12
PHGDH-233ENST00000642021 GBE1Q04446 702 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 SLC9A4Q6AI14 798 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 TMPRSS6Q8IU80 811 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 MAP7D3Q8IWC1 876 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 MMP19Q99542 508 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 B3GNT5Q9BYG0 378 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 KLC2Q9H0B6 622 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 DLGAP2Q9P1A6 1054 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 SLC17A6Q9P2U8 582 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 PLA2G4CQ9UP65 541 aa14.33□□□□□ -0.12
PHGDH-233ENST00000642021 PRR5-ARHGAP8B1AHC4 643 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 GSRP00390 522 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 RAP1GDS1P52306 607 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 ALDH18A1P54886 795 aaKnown RBP14.32□□□□□ -0.12
PHGDH-233ENST00000642021 INHBEP58166 350 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 ARHGAP8P85298 464 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 LCLAT1Q6UWP7 414 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 RIOX2Q8IUF8 465 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 SMC1BQ8NDV3 1235 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 PHC3Q8NDX5 983 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 TRPM4Q8TD43 1214 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 ZNF483Q8TF39 744 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-233ENST00000642021 RNPEPQ9H4A4 650 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms