RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 NUDT2P50583 147 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 GTF2A2P52657 109 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 EMP3P54852 163 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 DCTN2Q13561 401 aaKnown RBP14.24□□□□□ -0.13
SCARB2-227ENST00000640957 ATP1A4Q13733 1029 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 SLC15A2Q16348 729 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 SPDYAQ5MJ70 313 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 CIAPIN1Q6FI81 312 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 KLC3Q6P597 504 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 RELL1Q8IUW5 271 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 RCOR2Q8IZ40 523 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 MPP5Q8N3R9 675 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 JOSD2Q8TAC2 188 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 TFB1MQ8WVM0 346 aaKnown RBP14.24□□□□□ -0.13
SCARB2-227ENST00000640957 LRGUKQ96M69 825 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 SUDS3Q9H7L9 328 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-227ENST00000640957 INIPQ9NRY2 104 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 GPATCH2LQ9NWQ4 482 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 SLC9A2Q9UBY0 812 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 PLLPQ9Y342 182 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 FKBP6O75344 327 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 ITGBL1O95965 494 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 ENO3P13929 434 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 PSMA2P25787 234 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 CDKN2BP42772 138 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 NPTX2P47972 431 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 SLC39A4Q6P5W5 647 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 MXRA8Q9BRK3 442 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 PCDH9Q9HC56 1237 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 PTTG2Q9NZH5 202 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 ZC3H7BQ9UGR2 993 aaKnown RBP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 MYH9P35579 1960 aaKnown RBP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 CD19P15391 556 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 EIF4BP23588 611 aaKnown RBP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 YWHABP31946 246 aaKnown RBP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 CCR10P46092 362 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 FSTL1Q12841 308 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 KRT81Q14533 505 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 ZNF554Q86TJ5 538 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 SLC9A9Q8IVB4 645 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 KCTD6Q8NC69 237 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 GIPC3Q8TF64 312 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 SENP6Q9GZR1 1112 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 MRPL47Q9HD33 250 aaKnown RBP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 KCNH7Q9NS40 1196 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 CNTN3Q9P232 1028 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 HERC5Q9UII4 1024 aaKnown RBP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 TBX20Q9UMR3 447 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 SMIM31A0A1B0GVY4 71 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 ZC3H11AO75152 810 aaKnown RBP eCLIP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 DHRS4L1P0CG22 281 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 P4HA1P13674 534 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 ITGAXP20702 1163 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 ADORA2AP29274 412 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 SLC27A3Q5K4L6 730 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 SLC44A1Q8WWI5 657 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 CCT7Q99832 543 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 WDR55Q9H6Y2 383 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 KMT5AQ9NQR1 393 aa14.23□□□□□ -0.13
SCARB2-227ENST00000640957 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-227ENST00000640957 MYO18AQ92614 2054 aaKnown RBP14.22□□□□□ -0.13
SCARB2-227ENST00000640957 PTPN1P18031 435 aaKnown RBP14.22□□□□□ -0.13
SCARB2-227ENST00000640957 SAT1P21673 171 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 NOVP48745 357 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 SERPINB8P50452 374 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 SLC18A1P54219 525 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 NLRP11P59045 1033 aaKnown RBP14.22□□□□□ -0.13
SCARB2-227ENST00000640957 TMEM132AQ24JP5 1023 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 ATG16L1Q676U5 607 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 KIAA0319LQ8IZA0 1049 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 CDRT15Q96T59 188 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 TBC1D22BQ9NU19 505 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 RREB1Q92766 1687 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 ATAD5Q96QE3 1844 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 H3BNX3 289 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 ADCY6O43306 1168 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 ARRB2P32121 409 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 GPC3P51654 580 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 HDAC4P56524 1084 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 DPYSL3Q14195 570 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 TCEAL1Q15170 157 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 TDRD10Q5VZ19 366 aaKnown RBP14.22□□□□□ -0.13
SCARB2-227ENST00000640957 ANO5Q75V66 913 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 FASTKD5Q7L8L6 764 aaKnown RBP14.22□□□□□ -0.13
SCARB2-227ENST00000640957 RAVER1Q8IY67 606 aaKnown RBP14.22□□□□□ -0.13
SCARB2-227ENST00000640957 CEP41Q9BYV8 373 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 FIS1Q9Y3D6 152 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 NUB1Q9Y5A7 615 aa14.22□□□□□ -0.13
SCARB2-227ENST00000640957 CCDC78A2IDD5 438 aa14.21□□□□□ -0.13
SCARB2-227ENST00000640957 XRCC1P18887 633 aaPredicted RBP14.21□□□□□ -0.13
SCARB2-227ENST00000640957 CYP24A1Q07973 514 aa14.21□□□□□ -0.13
SCARB2-227ENST00000640957 PPP2R5DQ14738 602 aa14.21□□□□□ -0.13
SCARB2-227ENST00000640957 PDPK2PQ6A1A2 396 aa14.21□□□□□ -0.13
SCARB2-227ENST00000640957 OGFOD2Q6N063 350 aa14.21□□□□□ -0.13
SCARB2-227ENST00000640957 MAVSQ7Z434 540 aa14.21□□□□□ -0.13
SCARB2-227ENST00000640957 TRIM50Q86XT4 487 aa14.21□□□□□ -0.13
SCARB2-227ENST00000640957 MYO1HQ8N1T3 1032 aa14.21□□□□□ -0.13
SCARB2-227ENST00000640957 OR5B17Q8NGF7 314 aa14.21□□□□□ -0.13
SCARB2-227ENST00000640957 ZNF606Q8WXB4 792 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms