RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 NEK3P51956 506 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 RPL10AP62906 217 aaKnown RBP15.14■□□□□ 0.01
SCARB2-221ENST00000640341 PPP1R26Q5T8A7 1209 aaPredicted RBP15.14■□□□□ 0.01
SCARB2-221ENST00000640341 LGSNQ5TDP6 509 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 UNC5AQ6ZN44 842 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 TSHZ1Q6ZSZ6 1077 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.14■□□□□ 0.01
SCARB2-221ENST00000640341 EFCAB3Q8N7B9 438 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 PPFIBP2Q8ND30 876 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 PTCD3Q96EY7 689 aaKnown RBP15.14■□□□□ 0.01
SCARB2-221ENST00000640341 C2orf40Q9H1Z8 148 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 TTLL3Q9Y4R7 772 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 C2CD4BA6NLJ0 364 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 ATP6V1C1P21283 382 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 KLC1Q07866 573 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 VGLL4Q14135 290 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 PPP2R5DQ14738 602 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 CCDC14Q49A88 953 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 CAND1Q86VP6 1230 aaKnown RBP15.13■□□□□ 0.01
SCARB2-221ENST00000640341 CRLF3Q8IUI8 442 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 RBM15BQ8NDT2 890 aaKnown RBP15.13■□□□□ 0.01
SCARB2-221ENST00000640341 FNIP1Q8TF40 1166 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 NRG4Q8WWG1 115 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 FAM167AQ96KS9 214 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 CXCL16Q9H2A7 254 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 USP29Q9HBJ7 922 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 EFR3BQ9Y2G0 817 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 HES2Q9Y543 173 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 ZBTB42B2RXF5 422 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 USP1O94782 785 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 UBTFL6P0CB48 400 aaPredicted RBP15.13■□□□□ 0.01
SCARB2-221ENST00000640341 EPHB1P54762 984 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 MRPS5P82675 430 aaKnown RBP15.13■□□□□ 0.01
SCARB2-221ENST00000640341 TMEM132DQ14C87 1099 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 CES4AQ5XG92 561 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 OR6B3Q8NGW1 331 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 SKA1Q96BD8 255 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 CLMNQ96JQ2 1002 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 SYT15Q9BQS2 421 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 ACSS2Q9NR19 701 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 ZNF646O15015 1829 aaPredicted RBP15.13■□□□□ 0.01
SCARB2-221ENST00000640341 LOC100653049A0A140TA62 436 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 PRR5-ARHGAP8B1AHC4 643 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 KRT34O76011 436 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 PSMG1O95456 288 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 VHLP40337 213 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 ABCG1P45844 678 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 GTF2A2P52657 109 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 ARHGAP8P85298 464 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 TTLL12Q14166 644 aaPredicted RBP15.13■□□□□ 0.01
SCARB2-221ENST00000640341 C1orf146Q5VVC0 180 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 SHKBP1Q8TBC3 707 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 NDRG1Q92597 394 aaKnown RBP15.13■□□□□ 0.01
SCARB2-221ENST00000640341 USP6NLQ92738 828 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 FAM149B1Q96BN6 582 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 MCRS1Q96EZ8 462 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 PPP1R36Q96LQ0 422 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 POPDC2Q9HBU9 364 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 LRRC42Q9Y546 428 aa15.13■□□□□ 0.01
SCARB2-221ENST00000640341 A6NJR5 290 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 KRT38O76015 456 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 MYCNP04198 464 aaPredicted RBP15.12■□□□□ 0.01
SCARB2-221ENST00000640341 LINGO3P0C6S8 592 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 ZCCHC18P0CG32 403 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 P4HA1P13674 534 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 MBTD1Q05BQ5 628 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 PEX6Q13608 980 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 THEMIS2Q5TEJ8 643 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 LBX2Q6XYB7 198 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 LRRC74BQ6ZQY2 392 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 SULF1Q8IWU6 871 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 CCNYQ8ND76 341 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 PCDH18Q9HCL0 1135 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 SSU72Q9NP77 194 aaKnown RBP15.12■□□□□ 0.01
SCARB2-221ENST00000640341 LNPEPQ9UIQ6 1025 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 PLLPQ9Y342 182 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 WDR27A2RRH5 827 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 SLC15A5A6NIM6 579 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 PPEF2O14830 753 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 APOEP02649 317 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 VDRP11473 427 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 INSRRP14616 1297 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 CYP2F1P24903 491 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 ADORA2AP29274 412 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 PDE1BQ01064 536 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 SLC10A6Q3KNW5 377 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 FAM47CQ5HY64 1035 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 RNF220Q5VTB9 566 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 MOB2Q70IA6 237 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 PYROXD2Q8N2H3 581 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 PQLC3Q8N755 202 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 NT5C1AQ9BXI3 368 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 ELP3Q9H9T3 547 aa15.12■□□□□ 0.01
SCARB2-221ENST00000640341 CCDC78A2IDD5 438 aa15.11■□□□□ 0.01
SCARB2-221ENST00000640341 MAP3K13O43283 966 aa15.11■□□□□ 0.01
SCARB2-221ENST00000640341 ZNF286BP0CG31 522 aa15.11■□□□□ 0.01
SCARB2-221ENST00000640341 ATG16L1Q676U5 607 aa15.11■□□□□ 0.01
SCARB2-221ENST00000640341 CDCA2Q69YH5 1023 aaPredicted RBP15.11■□□□□ 0.01
SCARB2-221ENST00000640341 KCNT2Q6UVM3 1135 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms