RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ZNF260Q3ZCT1 412 aa5.71□□□□□ -1.5
CCDC7-216ENST00000640058 FAM71DQ8N9W8 422 aa5.71□□□□□ -1.5
CCDC7-216ENST00000640058 C9orf106Q8NAJ2 232 aa5.71□□□□□ -1.5
CCDC7-216ENST00000640058 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.71□□□□□ -1.5
CCDC7-216ENST00000640058 KAZALD1Q96I82 304 aa5.71□□□□□ -1.5
CCDC7-216ENST00000640058 UNKQ9C0B0 810 aaKnown RBP5.71□□□□□ -1.5
CCDC7-216ENST00000640058 SAP30LQ9HAJ7 183 aa5.71□□□□□ -1.5
CCDC7-216ENST00000640058 PI4KBQ9UBF8 816 aa5.71□□□□□ -1.5
CCDC7-216ENST00000640058 CAPN11Q9UMQ6 739 aa5.71□□□□□ -1.5
CCDC7-216ENST00000640058 VPS4AQ9UN37 437 aa5.71□□□□□ -1.5
CCDC7-216ENST00000640058 SOCS2O14508 198 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 WDR47O94967 919 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 IL18RAPO95256 599 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 FGBP02675 491 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 RPL17P18621 184 aaKnown RBP5.7□□□□□ -1.5
CCDC7-216ENST00000640058 ATICP31939 592 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 GALNSP34059 522 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 PIK3CBP42338 1070 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 CCDC15Q0P6D6 951 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 FHL3Q13643 280 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 TECPR1Q7Z6L1 1165 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 CCDC33Q8N5R6 958 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 C16orf52Q8NHV5 167 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 HMCESQ96FZ2 354 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 FAM227BQ96M60 508 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 SIGLEC11Q96RL6 698 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 ADGRE3Q9BY15 652 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 ZCWPW1Q9H0M4 648 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 VPS45Q9NRW7 570 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 RGS17Q9UGC6 210 aaPredicted RBP5.7□□□□□ -1.5
CCDC7-216ENST00000640058 FZD4Q9ULV1 537 aa5.7□□□□□ -1.5
CCDC7-216ENST00000640058 A0A087WZ62 844 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 POM121BA6NF01 834 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 THAP12O43422 761 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 PRF1P14222 555 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 MTAPQ13126 283 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 CLCA4Q14CN2 919 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 PFKFB3Q16875 520 aaPredicted RBP5.69□□□□□ -1.5
CCDC7-216ENST00000640058 TRIM71Q2Q1W2 868 aaKnown RBP5.69□□□□□ -1.5
CCDC7-216ENST00000640058 TMEM63BQ5T3F8 832 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 AWAT2Q6E213 333 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 CRTC1Q6UUV9 634 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 DGKHQ86XP1 1220 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 KRT78Q8N1N4 520 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 MBD3L2Q8NHZ7 208 aaPredicted RBP5.69□□□□□ -1.5
CCDC7-216ENST00000640058 PIGOQ8TEQ8 1089 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 COQ8BQ96D53 544 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 ZDHHC12Q96GR4 267 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 HIC2Q96JB3 615 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 GJB4Q9NTQ9 266 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 PCDHB2Q9Y5E7 798 aa5.69□□□□□ -1.5
CCDC7-216ENST00000640058 COL15A1P39059 1388 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 TMIGD3P0DMS9 266 aaPredicted RBP5.68□□□□□ -1.5
CCDC7-216ENST00000640058 ITGB6P18564 788 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 TACR3P29371 465 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 PBX1P40424 430 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 RAE1P78406 368 aaKnown RBP5.68□□□□□ -1.5
CCDC7-216ENST00000640058 ID2Q02363 134 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 CFHR1Q03591 330 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 ZNF543Q08ER8 600 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 GPS1Q13098 491 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 C10orf25Q5T742 122 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 ANO7Q6IWH7 933 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 MRPL10Q7Z7H8 261 aaKnown RBP5.68□□□□□ -1.5
CCDC7-216ENST00000640058 TTC17Q96AE7 1141 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 TMEM79Q9BSE2 394 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 CINPQ9BW66 212 aaPredicted RBP5.68□□□□□ -1.5
CCDC7-216ENST00000640058 ARL8BQ9NVJ2 186 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 GAR1Q9NY12 217 aaKnown RBP5.68□□□□□ -1.5
CCDC7-216ENST00000640058 MAFFQ9ULX9 164 aa5.68□□□□□ -1.5
CCDC7-216ENST00000640058 PPM1GO15355 546 aaPredicted RBP5.67□□□□□ -1.5
CCDC7-216ENST00000640058 MBPP02686 304 aaPredicted RBP5.67□□□□□ -1.5
CCDC7-216ENST00000640058 ARP10275 920 aa5.67□□□□□ -1.5
CCDC7-216ENST00000640058 DRD1P21728 446 aa5.67□□□□□ -1.5
CCDC7-216ENST00000640058 JAK3P52333 1124 aa5.67□□□□□ -1.5
CCDC7-216ENST00000640058 IRF2BP2Q7Z5L9 587 aa5.67□□□□□ -1.5
CCDC7-216ENST00000640058 KRT73Q86Y46 540 aa5.67□□□□□ -1.5
CCDC7-216ENST00000640058 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.67□□□□□ -1.5
CCDC7-216ENST00000640058 ATP11CQ8NB49 1132 aa5.67□□□□□ -1.5
CCDC7-216ENST00000640058 SUN3Q8TAQ9 357 aa5.67□□□□□ -1.5
CCDC7-216ENST00000640058 SCNM1Q9BWG6 230 aa5.67□□□□□ -1.5
CCDC7-216ENST00000640058 NUAK2Q9H093 628 aa5.67□□□□□ -1.5
CCDC7-216ENST00000640058 FOXP1Q9H334 677 aaPredicted RBP5.67□□□□□ -1.5
CCDC7-216ENST00000640058 RRHO14718 337 aa5.66□□□□□ -1.5
CCDC7-216ENST00000640058 THBS4P35443 961 aa5.66□□□□□ -1.5
CCDC7-216ENST00000640058 WDR5P61964 334 aaKnown RBP5.66□□□□□ -1.5
CCDC7-216ENST00000640058 BFSP2Q13515 415 aa5.66□□□□□ -1.5
CCDC7-216ENST00000640058 DNASE1L3Q13609 305 aa5.66□□□□□ -1.5
CCDC7-216ENST00000640058 LAMB3Q13751 1172 aa5.66□□□□□ -1.5
CCDC7-216ENST00000640058 ACOX1Q15067 660 aa5.66□□□□□ -1.5
CCDC7-216ENST00000640058 AASDHQ4L235 1098 aaPredicted RBP5.66□□□□□ -1.5
CCDC7-216ENST00000640058 KRT28Q7Z3Y7 464 aa5.66□□□□□ -1.5
CCDC7-216ENST00000640058 ANKRD13BQ86YJ7 626 aa5.66□□□□□ -1.5
CCDC7-216ENST00000640058 TM2D2Q9BX73 214 aa5.66□□□□□ -1.5
CCDC7-216ENST00000640058 DDX21Q9NR30 783 aaKnown RBP eCLIP5.66□□□□□ -1.5
CCDC7-216ENST00000640058 FOXN3O00409 490 aaPredicted RBP5.65□□□□□ -1.5
CCDC7-216ENST00000640058 INPPL1O15357 1258 aa5.65□□□□□ -1.5
CCDC7-216ENST00000640058 CCNT2O60583 730 aaKnown RBP5.65□□□□□ -1.5
CCDC7-216ENST00000640058 NTN1O95631 604 aa5.65□□□□□ -1.5
CCDC7-216ENST00000640058 CTSAP10619 480 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms