RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 PRAMEF18Q5VWM3 479 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 CASP10Q92851 521 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 SEPHS2Q99611 448 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 UBP1Q9NZI7 540 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 TUBGCP4Q9UGJ1 667 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 A0A0U1RQJ8 604 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 WDR27A2RRH5 827 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 KBTBD13C9JR72 458 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 HSMCR30P0CW71 290 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 GCLCP48506 637 aaPredicted RBP19.01■□□□□ 0.63
SCARB2-213ENST00000638680 IL5RAQ01344 420 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 SV2AQ7L0J3 742 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 SPATA16Q9BXB7 569 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 ABI2Q9NYB9 513 aaPredicted RBP19.01■□□□□ 0.63
SCARB2-213ENST00000638680 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 TNFAIP8O95379 198 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 POU1F1P28069 291 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 RRM2P31350 389 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 CDK16Q00536 496 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 TIGD7Q6NT04 549 aaPredicted RBP19.01■□□□□ 0.63
SCARB2-213ENST00000638680 PRDM4Q9UKN5 801 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 DDX3XO00571 662 aaKnown RBP eCLIP19.01■□□□□ 0.633e-14■■■■■ 29.4
SCARB2-213ENST00000638680 BCL10O95999 233 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 TMEM176AQ96HP8 235 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 RPRD1AQ96P16 312 aaPredicted RBP19.01■□□□□ 0.63
SCARB2-213ENST00000638680 NMRK2Q9NPI5 230 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 RNF181Q9P0P0 153 aa19.01■□□□□ 0.63
SCARB2-213ENST00000638680 DRG1Q9Y295 367 aaKnown RBP19.01■□□□□ 0.63
SCARB2-213ENST00000638680 AK9Q5TCS8 1911 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 C1orf232A0A0U1RR37 186 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 CPSF4O95639 269 aaKnown RBP19■□□□□ 0.63
SCARB2-213ENST00000638680 IRGCQ6NXR0 463 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 ADGRA1Q86SQ6 560 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 ZFRQ96KR1 1074 aaKnown RBP19■□□□□ 0.63
SCARB2-213ENST00000638680 SLC7A5P2Q9GIP4 190 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 PAIP1Q9H074 479 aaKnown RBP19■□□□□ 0.63
SCARB2-213ENST00000638680 GAS2O43903 313 aaKnown RBP19■□□□□ 0.63
SCARB2-213ENST00000638680 PSMB9P28065 219 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 C1QBPQ07021 282 aaKnown RBP19■□□□□ 0.63
SCARB2-213ENST00000638680 CCDC153Q494R4 210 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 ARHGAP22Q7Z5H3 698 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 WDR49Q8IV35 697 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 OPTNQ96CV9 577 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 SH3BP1Q9Y3L3 701 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 TRIM24O15164 1050 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 TSC22D2O75157 780 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 ZBTB7AO95365 584 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 JCHAINP01591 159 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 NUMBP49757 651 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 MEA1Q16626 185 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 PRRG1O14668 218 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 CCT8P50990 548 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 PPIDQ08752 370 aaKnown RBP19■□□□□ 0.63
SCARB2-213ENST00000638680 VAC14Q08AM6 782 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 RNF148Q8N7C7 305 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 YIPF2Q9BWQ6 316 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 INTS13Q9NVM9 706 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 CYP39A1Q9NYL5 469 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 MROH7Q68CQ1 1323 aa19■□□□□ 0.63
SCARB2-213ENST00000638680 MAPK1P28482 360 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 DHFR2Q86XF0 187 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 CLVS1Q8IUQ0 354 aaPredicted RBP18.99■□□□□ 0.63
SCARB2-213ENST00000638680 SLC44A2Q8IWA5 706 aaPredicted RBP18.99■□□□□ 0.63
SCARB2-213ENST00000638680 CEP41Q9BYV8 373 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 ROGDIQ9GZN7 287 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 STAG3L1P0CL83 205 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 ODC1P11926 461 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 CDC16Q13042 620 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 ZCCHC23Q6ZST2 131 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 KCND1Q9NSA2 647 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 SLC2A3P11169 496 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 GRTP1Q5TC63 336 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 CPB2Q96IY4 423 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 PNMA5Q96PV4 448 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 SAR1AQ9NR31 198 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 COMMD8Q9NX08 183 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 CEP152O94986 1710 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 PSMG1O95456 288 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 BCAT1P54687 386 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 PRKAA1Q13131 559 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 NEDD8Q15843 81 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 SLC22A9Q8IVM8 553 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 ATG16L2Q8NAA4 619 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 ACER1Q8TDN7 264 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 PIH1D1Q9NWS0 290 aaKnown RBP18.99■□□□□ 0.63
SCARB2-213ENST00000638680 CROTQ9UKG9 612 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 SLC25A27O95847 323 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 SUPT20HL2P0C7V6 817 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 RGS2P41220 211 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 SOX10P56693 466 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 FAAP100Q0VG06 881 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 CNTN1Q12860 1018 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 VPS33AQ96AX1 596 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 PHF21BQ96EK2 531 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 DNAJC18Q9H819 358 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 VTA1Q9NP79 307 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 KRT84Q9NSB2 600 aa18.99■□□□□ 0.63
SCARB2-213ENST00000638680 ZNF862O60290 1169 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 ALOX15P16050 662 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 RPA3P35244 121 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms