RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 FAM209AQ5JX71 171 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 OGFOD2Q6N063 350 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 HAUS6Q7Z4H7 955 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 CLVS1Q8IUQ0 354 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-221ENST00000638141 C12orf56Q8IXR9 622 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 DEFB107AQ8IZN7 70 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 CPSF7Q8N684 471 aaKnown RBP12.42□□□□□ -0.42
CAPN3-221ENST00000638141 PDPRQ8NCN5 879 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 KBTBD7Q8WVZ9 684 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 SLC44A1Q8WWI5 657 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 SHC3Q92529 594 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 NACC2Q96BF6 587 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 COA7Q96BR5 231 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 CCDC124Q96CT7 223 aaKnown RBP12.42□□□□□ -0.42
CAPN3-221ENST00000638141 SERPINI1Q99574 410 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 PDGFDQ9GZP0 370 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-221ENST00000638141 CPVLQ9H3G5 476 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 PCDH9Q9HC56 1237 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 VAT1LQ9HCJ6 419 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 RIC8BQ9NVN3 520 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 KCND2Q9NZV8 630 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 SEPT3Q9UH03 358 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 EBF1Q9UH73 591 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 ANAPC7Q9UJX3 599 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 PLLPQ9Y342 182 aa12.42□□□□□ -0.42
CAPN3-221ENST00000638141 CFAP99D6REC4 459 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 TRPA1O75762 1119 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 SGPL1O95470 568 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 STAMBPO95630 424 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 ARSEP51690 589 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 MFAP3P55082 362 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 GALNT2Q10471 571 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 AP3B2Q13367 1082 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 ATP1A4Q13733 1029 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 AGAP7PQ5VUJ5 663 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 ZNF746Q6NUN9 644 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-221ENST00000638141 MCF2L2Q86YR7 1114 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 MMAAQ8IVH4 418 aaKnown RBP12.41□□□□□ -0.42
CAPN3-221ENST00000638141 SERAC1Q96JX3 654 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 TRIM56Q9BRZ2 755 aaKnown RBP12.41□□□□□ -0.42
CAPN3-221ENST00000638141 RTKNQ9BST9 563 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 EHD1Q9H4M9 534 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 RPF2Q9H7B2 306 aaKnown RBP12.41□□□□□ -0.42
CAPN3-221ENST00000638141 ARHGAP26Q9UNA1 814 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 SNCAIPQ9Y6H5 919 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.41□□□□□ -0.42
CAPN3-221ENST00000638141 COPEO14579 308 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 SPAG6O75602 509 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 RPS6KA4O75676 772 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 PROSCO94903 275 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 TRIM49P0CI25 452 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 TRIM49CP0CI26 452 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 ZNF26P17031 533 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-221ENST00000638141 ENDOUP21128 410 aaKnown RBP12.41□□□□□ -0.42
CAPN3-221ENST00000638141 PTPN7P35236 360 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 BMXP51813 675 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 YWHAGP61981 247 aaKnown RBP eCLIP12.41□□□□□ -0.42
CAPN3-221ENST00000638141 GPS1Q13098 491 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 PTK7Q13308 1070 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 LSM12Q3MHD2 195 aaKnown RBP12.41□□□□□ -0.42
CAPN3-221ENST00000638141 PPP1R2P3Q6NXS1 205 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 LYSMD3Q7Z3D4 306 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 ARHGEF19Q8IW93 802 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 WDR75Q8IWA0 830 aaKnown RBP12.41□□□□□ -0.42
CAPN3-221ENST00000638141 TAMM41Q96BW9 452 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 MRRFQ96E11 262 aaKnown RBP12.41□□□□□ -0.42
CAPN3-221ENST00000638141 FERMT1Q9BQL6 677 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 FRMD8P1Q9BZ68 369 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-221ENST00000638141 OLAHQ9NV23 265 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 THAP1Q9NVV9 213 aa12.41□□□□□ -0.42
CAPN3-221ENST00000638141 EMSYQ7Z589 1322 aa12.4□□□□□ -0.42
CAPN3-221ENST00000638141 SLC22A1O15245 554 aa12.4□□□□□ -0.42
CAPN3-221ENST00000638141 CAPN15O75808 1086 aa12.4□□□□□ -0.42
CAPN3-221ENST00000638141 GABRB3P28472 473 aa12.4□□□□□ -0.42
CAPN3-221ENST00000638141 MXI1P50539 228 aa12.4□□□□□ -0.42
CAPN3-221ENST00000638141 ALCAMQ13740 583 aa12.4□□□□□ -0.42
CAPN3-221ENST00000638141 TCHHL1Q5QJ38 904 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-221ENST00000638141 TTC23LQ6PF05 361 aa12.4□□□□□ -0.42
CAPN3-221ENST00000638141 VASH1Q7L8A9 365 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-221ENST00000638141 EXOC8Q8IYI6 725 aa12.4□□□□□ -0.42
CAPN3-221ENST00000638141 KLF6Q99612 283 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-221ENST00000638141 PARVGQ9HBI0 331 aa12.4□□□□□ -0.42
CAPN3-221ENST00000638141 CHORDC1Q9UHD1 332 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-221ENST00000638141 APOBEC2Q9Y235 224 aaKnown RBP12.4□□□□□ -0.42
CAPN3-221ENST00000638141 GOLGB1Q14789 3259 aaKnown RBP12.4□□□□□ -0.42
CAPN3-221ENST00000638141 USP17L5A8MUK1 530 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 CENPBD1B2RD01 187 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 SORBS2O94875 1100 aaKnown RBP12.4□□□□□ -0.43
CAPN3-221ENST00000638141 FARP2O94887 1054 aaPredicted RBP12.4□□□□□ -0.43
CAPN3-221ENST00000638141 NTSR2O95665 410 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 SSTR1P30872 391 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 GNL1P36915 607 aaPredicted RBP12.4□□□□□ -0.43
CAPN3-221ENST00000638141 CDK8P49336 464 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 SNRPFP62306 86 aaKnown RBP12.4□□□□□ -0.43
CAPN3-221ENST00000638141 CTBSQ01459 385 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 NSUN2Q08J23 767 aaKnown RBP eCLIP12.4□□□□□ -0.43
CAPN3-221ENST00000638141 PDK1Q15118 436 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 CYP2A13Q16696 494 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 UBE2SQ16763 222 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 TRIM16LQ309B1 348 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms