RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 STYXL1Q9Y6J8 313 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.73□□□□□ -1.49
CHD2-227ENST00000637572 PI4K2BG5E9Z4 385 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 FGBP02675 491 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 RENBPP51606 427 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 PRAMEP78395 509 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 SLC7A5Q01650 507 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 CDH18Q13634 790 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 ATG16L1Q676U5 607 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 IL31Q6EBC2 164 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 SDE2Q6IQ49 451 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 LCLAT1Q6UWP7 414 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 LRIG3Q6UXM1 1119 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 DENND5BQ6ZUT9 1274 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 JAMLQ86YT9 394 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.73□□□□□ -1.49
CHD2-227ENST00000637572 PPIL6Q8IXY8 311 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 RIBC1Q8N443 379 aaPredicted RBP5.73□□□□□ -1.49
CHD2-227ENST00000637572 CABS1Q96KC9 395 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 RPRD1AQ96P16 312 aaPredicted RBP5.73□□□□□ -1.49
CHD2-227ENST00000637572 TTPALQ9BTX7 342 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 CAPS2Q9BXY5 557 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 UBXN6Q9BZV1 441 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 ARHGAP39Q9C0H5 1083 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 MUC3BQ9H195 1237 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 ISCUQ9H1K1 167 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 NXF3Q9H4D5 531 aaKnown RBP5.73□□□□□ -1.49
CHD2-227ENST00000637572 SMYD3Q9H7B4 428 aa5.73□□□□□ -1.49
CHD2-227ENST00000637572 RBAK-RBAKDNI3L0D1 243 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 FGF10O15520 208 aaPredicted RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 CNMDO75829 334 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 HTR7P34969 479 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 PCK1P35558 622 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 CLCN6P51797 869 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 CCL23P55773 120 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 TBX4P57082 545 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 ADIGQ0VDE8 80 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 SLC39A12Q504Y0 691 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 PPM1LQ5SGD2 360 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 GKAP1Q5VSY0 366 aaPredicted RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 SPOCD1Q6ZMY3 1216 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 KATNAL2Q8IYT4 538 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 TAB3Q8N5C8 712 aaPredicted RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 FNIP1Q8TF40 1166 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 IRGQQ8WZA9 623 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 ALKBH8Q96BT7 664 aaKnown RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 ACBD6Q9BR61 282 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 TSSK1BQ9BXA7 367 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 DUSP16Q9BY84 665 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 IRX2Q9BZI1 471 aaPredicted RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 ROPN1BQ9BZX4 212 aaPredicted RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 LACRTQ9GZZ8 138 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 ROPN1Q9HAT0 212 aaPredicted RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 RAD54BQ9Y620 910 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 SLC12A8A0AV02 714 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 PIK3R2O00459 728 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 CILPO75339 1184 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 CCL5P13501 91 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 PPP3CCP48454 512 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 ZNF143P52747 638 aaPredicted RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 CDH8P55286 799 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 PDIA2Q13087 525 aaKnown RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 POLD3Q15054 466 aaPredicted RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 ANKRD42Q8N9B4 389 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 EIF1ADQ8N9N8 165 aaKnown RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 WNT8BQ93098 351 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 CFAP36Q96G28 342 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 ASB16Q96NS5 453 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 TMEM175Q9BSA9 504 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 TRHDEQ9UKU6 1024 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 A0A0U1RQF3 1178 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 NEMP1O14524 444 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 ZNF197O14709 1029 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 EIF3HO15372 352 aaKnown RBP eCLIP5.72□□□□□ -1.493e-6■■□□□ 12.8
CHD2-227ENST00000637572 PEX10O60683 326 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 GJB1P08034 283 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 C7P10643 843 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 GLUD2P49448 558 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 NOMO3P69849 1222 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 TMED2Q15363 201 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 ACCSLQ4AC99 568 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 RETSATQ6NUM9 610 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 CNKSR3Q6P9H4 555 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 IRF2BP2Q7Z5L9 587 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 PSTKQ8IV42 348 aaKnown RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 NUP93Q8N1F7 819 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 TTC8Q8TAM2 541 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 GANCQ8TET4 914 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 HASPINQ8TF76 798 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 COG1Q8WTW3 980 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 PIK3R5Q8WYR1 880 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 FUBP3Q96I24 572 aaKnown RBP eCLIP5.72□□□□□ -1.49
CHD2-227ENST00000637572 GOLPH3Q9H4A6 298 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 WHRNQ9P202 907 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 ZNF510Q9Y2H8 683 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 HES2Q9Y543 173 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 MUC6Q6W4X9 2439 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 AKAP11Q9UKA4 1901 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 A6NHS1 94 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 H0Y626 953 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms