RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	RSPRY1	Q96DX4	576 aa		27.22	■■□□□ 1.95
UBE3A-222	ENST00000630907	VCPIP1	Q96JH7	1222 aa		27.22	■■□□□ 1.95
UBE3A-222	ENST00000630907	NECAB3	Q96P71	396 aa	Predicted RBP	27.22	■■□□□ 1.95
UBE3A-222	ENST00000630907	SMPD4	Q9NXE4	827 aa		27.22	■■□□□ 1.95
UBE3A-222	ENST00000630907	RASAL2	Q9UJF2	1139 aa		27.22	■■□□□ 1.95
UBE3A-222	ENST00000630907	AKR1B10	O60218	316 aa		27.21	■■□□□ 1.95
UBE3A-222	ENST00000630907	GRAP2	O75791	330 aa		27.21	■■□□□ 1.95
UBE3A-222	ENST00000630907	ASGR2	P07307	311 aa		27.21	■■□□□ 1.95
UBE3A-222	ENST00000630907	UHRF1	Q96T88	793 aa	Predicted RBP	27.21	■■□□□ 1.95
UBE3A-222	ENST00000630907	RPP25	Q9BUL9	199 aa	Known RBP	27.21	■■□□□ 1.95
UBE3A-222	ENST00000630907	PLA2G2F	Q9BZM2	168 aa		27.21	■■□□□ 1.95
UBE3A-222	ENST00000630907	ISCU	Q9H1K1	167 aa		27.21	■■□□□ 1.95
UBE3A-222	ENST00000630907	NAALADL1	Q9UQQ1	740 aa		27.21	■■□□□ 1.95
UBE3A-222	ENST00000630907	LEFTY2	O00292	366 aa		27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	GSC	P56915	257 aa	Predicted RBP	27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	RNASE9	P60153	205 aa	Known RBP	27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	SLC18A3	Q16572	532 aa		27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	CCDC122	Q5T0U0	273 aa		27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	MSANTD2	Q6P1R3	559 aa		27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	ALKBH5	Q6P6C2	394 aa	Known RBP	27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	DNAAF5	Q86Y56	855 aa		27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	MIB1	Q86YT6	1006 aa		27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	DEFB106A	Q8N104	65 aa		27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	SH3RF2	Q8TEC5	729 aa		27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	SLC2A13	Q96QE2	648 aa		27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	KLF16	Q9BXK1	252 aa	Predicted RBP	27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	MARCH2	Q9P0N8	246 aa		27.2	■■□□□ 1.94
UBE3A-222	ENST00000630907	C5orf42	Q9H799	3197 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	DAB1	O75553	588 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	TCF3	P15923	654 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	ZXDB	P98169	803 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	GFPT1	Q06210	699 aa	Predicted RBP	27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	SYPL2	Q5VXT5	272 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	VIT	Q6UXI7	678 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	DDX42	Q86XP3	938 aa	Known RBP eCLIP	27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	RNF135	Q8IUD6	432 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	MFSD6L	Q8IWD5	586 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	TTC16	Q8NEE8	873 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	BPIFB1	Q8TDL5	484 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	ZFR	Q96KR1	1074 aa	Known RBP	27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	LRRC3B	Q96PB8	259 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	CD320	Q9NPF0	282 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	GKN1	Q9NS71	199 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	SFMBT1	Q9UHJ3	866 aa		27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	NUP210	Q8TEM1	1887 aa	Predicted RBP	27.19	■■□□□ 1.94
UBE3A-222	ENST00000630907	RRM1	P23921	792 aa		27.18	■■□□□ 1.94
UBE3A-222	ENST00000630907	COG7	P83436	770 aa		27.18	■■□□□ 1.94
UBE3A-222	ENST00000630907	USP4	Q13107	963 aa		27.18	■■□□□ 1.94
UBE3A-222	ENST00000630907	DCAF6	Q58WW2	860 aa		27.18	■■□□□ 1.94
UBE3A-222	ENST00000630907	SLC44A3	Q8N4M1	653 aa		27.18	■■□□□ 1.94
UBE3A-222	ENST00000630907	C3orf20	Q8ND61	904 aa		27.18	■■□□□ 1.94
UBE3A-222	ENST00000630907	DEPDC1B	Q8WUY9	529 aa		27.18	■■□□□ 1.94
UBE3A-222	ENST00000630907	TRIM11	Q96F44	468 aa		27.18	■■□□□ 1.94
UBE3A-222	ENST00000630907	SELENOO	Q9BVL4	669 aa		27.18	■■□□□ 1.94
UBE3A-222	ENST00000630907	METTL5	Q9NRN9	209 aa	Known RBP	27.18	■■□□□ 1.94
UBE3A-222	ENST00000630907	TMEM59L	Q9UK28	342 aa		27.18	■■□□□ 1.94
UBE3A-222	ENST00000630907	NENF	Q9UMX5	172 aa		27.18	■■□□□ 1.94
UBE3A-222	ENST00000630907	SLC12A8	A0AV02	714 aa		27.17	■■□□□ 1.94
UBE3A-222	ENST00000630907	PSMC3	P17980	439 aa		27.17	■■□□□ 1.94
UBE3A-222	ENST00000630907	FECH	P22830	423 aa		27.17	■■□□□ 1.94
UBE3A-222	ENST00000630907	GSDMD	P57764	484 aa		27.17	■■□□□ 1.94
UBE3A-222	ENST00000630907	ZNF77	Q15935	545 aa		27.17	■■□□□ 1.94
UBE3A-222	ENST00000630907	DNAJC24	Q6P3W2	148 aa		27.17	■■□□□ 1.94
UBE3A-222	ENST00000630907	TMTC1	Q8IUR5	882 aa		27.17	■■□□□ 1.94
UBE3A-222	ENST00000630907	YAF2	Q8IY57	180 aa		27.17	■■□□□ 1.94
UBE3A-222	ENST00000630907	DQX1	Q8TE96	717 aa	Known RBP	27.17	■■□□□ 1.94
UBE3A-222	ENST00000630907	ANP32B	Q92688	251 aa	Known RBP	27.17	■■□□□ 1.94
UBE3A-222	ENST00000630907	SMOC2	Q9H3U7	446 aa		27.17	■■□□□ 1.94
UBE3A-222	ENST00000630907	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	27.17	■■□□□ 1.94	4e-9	■■■■□ 20.3
UBE3A-222	ENST00000630907	CFAP97	Q9P2B7	532 aa		27.17	■■□□□ 1.94
UBE3A-222	ENST00000630907	MYBL1	P10243	752 aa		27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	IRF1	P10914	325 aa		27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	KRT3	P12035	628 aa		27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	NOS2	P35228	1153 aa		27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	MATK	P42679	507 aa		27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	TDG	Q13569	410 aa		27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	GRM2	Q14416	872 aa		27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	ARC	Q7LC44	396 aa		27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	RIN3	Q8TB24	985 aa		27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	ZNF653	Q96CK0	615 aa		27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	TRMT61B	Q9BVS5	477 aa	Known RBP	27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	SPTLC3	Q9NUV7	552 aa		27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	THG1L	Q9NWX6	298 aa	Known RBP	27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	CNOT8	Q9UFF9	292 aa	Known RBP	27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	SH3BP1	Q9Y3L3	701 aa		27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	HBS1L	Q9Y450	684 aa	Known RBP	27.16	■■□□□ 1.94
UBE3A-222	ENST00000630907	TCRBV5S1A1T	A0A578	114 aa		27.15	■■□□□ 1.94
UBE3A-222	ENST00000630907	SIGLEC16	A6NMB1	481 aa		27.15	■■□□□ 1.94
UBE3A-222	ENST00000630907	FCHO2	Q0JRZ9	810 aa		27.15	■■□□□ 1.94
UBE3A-222	ENST00000630907	MTF1	Q14872	753 aa		27.15	■■□□□ 1.94
UBE3A-222	ENST00000630907	SERPINB11	Q96P15	392 aa		27.15	■■□□□ 1.94
UBE3A-222	ENST00000630907	RRN3	Q9NYV6	651 aa		27.15	■■□□□ 1.94
UBE3A-222	ENST00000630907	GJB6	O95452	261 aa		27.14	■■□□□ 1.94
UBE3A-222	ENST00000630907	TRUB2	O95900	331 aa	Known RBP	27.14	■■□□□ 1.94
UBE3A-222	ENST00000630907	HMBS	P08397	361 aa		27.14	■■□□□ 1.94
UBE3A-222	ENST00000630907	ABCB4	P21439	1286 aa		27.14	■■□□□ 1.94
UBE3A-222	ENST00000630907	FLT3	P36888	993 aa		27.14	■■□□□ 1.94
UBE3A-222	ENST00000630907	KPNA1	P52294	538 aa	Predicted RBP	27.14	■■□□□ 1.94
UBE3A-222	ENST00000630907	PLEKHA7	Q6IQ23	1121 aa		27.14	■■□□□ 1.94
UBE3A-222	ENST00000630907	CC2D1A	Q6P1N0	951 aa	Predicted RBP	27.14	■■□□□ 1.94

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms