RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 TMEM191BP0C7N4 346 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 HARSP12081 509 aaKnown RBP3.74□□□□□ -1.81
VPS8-228ENST00000628962 TYRP14679 529 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 PTPRGP23470 1445 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 CYP2C18P33260 490 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 HSPA7P48741 367 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 CYP4F2P78329 520 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 NKX6-1P78426 367 aaPredicted RBP3.74□□□□□ -1.81
VPS8-228ENST00000628962 HOXA4Q00056 320 aaPredicted RBP3.74□□□□□ -1.81
VPS8-228ENST00000628962 PRDM2Q13029 1718 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 PPFIA1Q13136 1202 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 KHDC1Q4VXA5 237 aaKnown RBP3.74□□□□□ -1.81
VPS8-228ENST00000628962 PCID2Q5JVF3 399 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 L1TD1Q5T7N2 865 aaKnown RBP3.74□□□□□ -1.81
VPS8-228ENST00000628962 TAF2Q6P1X5 1199 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 GGT6Q6P531 493 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 SHC4Q6S5L8 630 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 PSD4Q8NDX1 1056 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 PPHLN1Q8NEY8 458 aaKnown RBP3.74□□□□□ -1.81
VPS8-228ENST00000628962 BRIX1Q8TDN6 353 aaKnown RBP3.74□□□□□ -1.81
VPS8-228ENST00000628962 BRI3BPQ8WY22 251 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 RITA1Q96K30 269 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 LYZL4Q96KX0 146 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 TBATAQ96M53 351 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 VRK1Q99986 396 aaPredicted RBP3.74□□□□□ -1.81
VPS8-228ENST00000628962 MACROD1Q9BQ69 325 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 PAGR1Q9BTK6 254 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 RRN3Q9NYV6 651 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 LAS1LQ9Y4W2 734 aaKnown RBP3.74□□□□□ -1.81
VPS8-228ENST00000628962 SCINQ9Y6U3 715 aa3.74□□□□□ -1.81
VPS8-228ENST00000628962 USP19O94966 1318 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 ZNF335Q9H4Z2 1342 aaPredicted RBP3.73□□□□□ -1.81
VPS8-228ENST00000628962 FHAD1B1AJZ9 1412 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 M0R3H8 397 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 EPB41L2O43491 1005 aaKnown RBP3.73□□□□□ -1.81
VPS8-228ENST00000628962 NPR1P16066 1061 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 ATP5F1P24539 256 aaPredicted RBP3.73□□□□□ -1.81
VPS8-228ENST00000628962 CD6P30203 668 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 DDIT3P35638 169 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 CASP2P42575 452 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 SUMO3P55854 103 aaPredicted RBP3.73□□□□□ -1.81
VPS8-228ENST00000628962 FMO1Q01740 532 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 TBX2Q13207 712 aaPredicted RBP3.73□□□□□ -1.81
VPS8-228ENST00000628962 ERV3-1Q14264 604 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 KRTAP27-1Q3LI81 207 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 ARL13BQ3SXY8 428 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 KHDC1LQ5JSQ8 128 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 VPS53Q5VIR6 699 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 KLHDC7AQ5VTJ3 777 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 LVRNQ6Q4G3 990 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 NAPRTQ6XQN6 538 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 C9orf47Q6ZRZ4 202 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 MAATS1Q7Z4T9 603 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 DTX2Q86UW9 622 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 TXLNBQ8N3L3 684 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 CYP2W1Q8TAV3 490 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 ZNF566Q969W8 418 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 SKA1Q96BD8 255 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 SUCLG2Q96I99 432 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 EIF2AK1Q9BQI3 630 aaKnown RBP3.73□□□□□ -1.81
VPS8-228ENST00000628962 COLEC11Q9BWP8 271 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 TTLL2Q9BWV7 592 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 WDCPQ9H6R7 721 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 DUSP22Q9NRW4 184 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 RLIMQ9NVW2 624 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 PIH1D1Q9NWS0 290 aaKnown RBP3.73□□□□□ -1.81
VPS8-228ENST00000628962 SIDT1Q9NXL6 827 aaKnown RBP3.73□□□□□ -1.81
VPS8-228ENST00000628962 KLHL13Q9P2N7 655 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 CPNE7Q9UBL6 633 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 AFF4Q9UHB7 1163 aaKnown RBP3.73□□□□□ -1.81
VPS8-228ENST00000628962 PGAP2Q9UHJ9 254 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 GPR52Q9Y2T5 361 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 LRRFIP2Q9Y608 721 aaKnown RBP3.73□□□□□ -1.81
VPS8-228ENST00000628962 BCORL1Q5H9F3 1711 aa3.73□□□□□ -1.81
VPS8-228ENST00000628962 PBRM1Q86U86 1689 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 CD109Q6YHK3 1445 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 TOP2AP11388 1531 aaKnown RBP3.72□□□□□ -1.81
VPS8-228ENST00000628962 CUX1P39880 1505 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 MAGI3Q5TCQ9 1506 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 KIAA0586Q9BVV6 1533 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 SRCAPQ6ZRS2 3230 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 PRSS29PA6NIE9 313 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 ERVV-2B6SEH9 535 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 F8W8V4 182 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 FCHO1O14526 889 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 PPM1DO15297 605 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 CHEK2O96017 543 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 ITGALP20701 1170 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 MALP21145 153 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 SCP2P22307 547 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 LIPAP38571 399 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 TOB1P50616 345 aaPredicted RBP3.72□□□□□ -1.81
VPS8-228ENST00000628962 DDX10Q13206 875 aaKnown RBP3.72□□□□□ -1.81
VPS8-228ENST00000628962 PRKG1Q13976 671 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 SIM2Q14190 667 aaPredicted RBP3.72□□□□□ -1.81
VPS8-228ENST00000628962 HABP2Q14520 560 aaPredicted RBP3.72□□□□□ -1.81
VPS8-228ENST00000628962 RBMS2Q15434 407 aaKnown RBP3.72□□□□□ -1.81
VPS8-228ENST00000628962 TAF12Q16514 161 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 MPEG1Q2M385 716 aa3.72□□□□□ -1.81
VPS8-228ENST00000628962 SLC35G1Q2M3R5 365 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 277.8 ms