RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 CNBD1Q8NA66 436 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CCDC197Q8NCU1 140 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SNX29Q8TEQ0 813 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 TANKQ92844 425 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 EMID1Q96A84 441 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SEC16BQ96JE7 1060 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 AIFM3Q96NN9 605 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PPP1R10Q96QC0 940 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 STRBPQ96SI9 672 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SPACA1Q9HBV2 294 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 GTF2IRD1Q9UHL9 959 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SERPINB13Q9UIV8 391 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PCDHB4Q9Y5E5 795 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PMF1-BGLAPU3KQ54 211 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PHLPP1O60346 1717 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ROBO1Q9Y6N7 1651 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ARHGEF28Q8N1W1 1705 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 GPR75-ASB3A0A0A6YYF3 556 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 NPIPA7E9PJI5 369 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ATP6V1G2-DDX39BF2Z307 99 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 FBP2O00757 339 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 TSPAN4O14817 238 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 FOXP2O15409 715 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CLOCKO15516 846 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 DCTN3O75935 186 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 GDF11O95390 407 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 RAB3DO95716 219 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ABCB1P08183 1280 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 NPIPA8P0DM63 369 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PRKCAP17252 672 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 TNFRSF8P28908 595 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ARFIP1P53367 373 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 AMPD2Q01433 879 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 GUCY2DQ02846 1103 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CHAF1BQ13112 559 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CCDC142Q17RM4 750 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC27A3Q5K4L6 730 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC10A5Q5PT55 438 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 FAM205BPQ63HN1 556 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CNTD1Q8N815 330 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 DENND1AQ8TEH3 1009 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 MCUR1Q96AQ8 359 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF570Q96NI8 536 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 MEIS3Q99687 375 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ZSCAN5AQ9BUG6 496 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 TREM1Q9NP99 234 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 TIMMDC1Q9NPL8 285 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 GLRX2Q9NS18 164 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ASB3Q9Y575 518 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PCDHGA8Q9Y5G5 932 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 EMILIN1Q9Y6C2 1016 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SBNO1A3KN83 1393 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TRAV20A0A0B4J274 112 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 C5orf60A6NFR6 353 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CCT8L1PA6NM43 557 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 E9PBE3 544 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 H3BM21 787 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 DNM1LO00429 736 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 MBP02144 154 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 APOA1P02647 267 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CYP1A1P04798 512 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 NUDT7P0C024 238 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ANPEPP15144 967 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ITGA2P17301 1181 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 RECQLP46063 649 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ARSDP51689 593 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CLCN4P51793 760 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ADCY7P51828 1080 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 PGDP52209 483 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 POLGP54098 1239 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 DRG2P55039 364 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 NPEPPSP55786 919 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 NLRP11P59045 1033 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 RHAGQ02094 409 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 GUCY1A3Q02108 690 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 HSPA14Q0VDF9 509 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF177Q13360 481 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 EPHA7Q15375 998 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ALG11Q2TAA5 492 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 RPS26P11Q5JNZ5 115 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TCTE1Q5JU00 501 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 SYDE2Q5VT97 1194 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 PTRHD1Q6GMV3 140 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 WDR73Q6P4I2 378 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 MAPKAPK5Q8IW41 473 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 BBS5Q8N3I7 341 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 LNX2Q8N448 690 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 MMGT1Q8N4V1 131 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TTC29Q8NA56 475 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC4A11Q8NBS3 891 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TTLQ8NG68 377 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TAMM41Q96BW9 452 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC47A1Q96FL8 570 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 MAGED4Q96JG8 741 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 UCN2Q96RP3 112 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TM9SF2Q99805 663 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 DHRS9Q9BPW9 319 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 LBHD1Q9BQE6 289 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms