RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 GREB1Q4ZG55 1949 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 ZNF840PA6NDX5 716 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 TMEM221A6NGB7 291 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 F8VZ95 297 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 PI4K2BG5E9Z4 385 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 RNF225M0QZC1 329 aaPredicted RBP7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 M0R296 226 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 PIK3R2O00459 728 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 TLR5O60602 858 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 TADA3O75528 432 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 GFPT2O94808 682 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 PRAMEF12O95522 483 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 IRF1P10914 325 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 PFKLP17858 780 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 STAT1P42224 750 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 IFNAR2P48551 515 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 KLK7P49862 253 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 KPNA1P52294 538 aaPredicted RBP7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 ZNF132P52740 706 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 SNX16P57768 344 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 ARID5AQ03989 594 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 KCNMA1Q12791 1236 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 CNGA2Q16280 664 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 ARHGAP29Q52LW3 1261 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 TMEM31Q5JXX7 168 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 RNFT1Q5M7Z0 435 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 TAF3Q5VWG9 929 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 BTBD8Q5XKL5 378 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 LRSAM1Q6UWE0 723 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 LCLAT1Q6UWP7 414 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 VITQ6UXI7 678 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 TMEM150AQ86TG1 271 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 DDX42Q86XP3 938 aaKnown RBP eCLIP7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 SIX5Q8N196 739 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 MSANTD4Q8NCY6 345 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 ZMIZ2Q8NF64 920 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 FLCNQ8NFG4 579 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 SH3RF2Q8TEC5 729 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 FAM149B1Q96BN6 582 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 SHDQ96IW2 340 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 CYP2S1Q96SQ9 504 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 RPP25Q9BUL9 199 aaKnown RBP7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 ULBP1Q9BZM6 244 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 MIS12Q9H081 205 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 EPHX3Q9H6B9 360 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 PLCB1Q9NQ66 1216 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 ARHGEF3Q9NR81 526 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 RASAL2Q9UJF2 1139 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 AJAP1Q9UKB5 411 aaPredicted RBP7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 STRIP2Q9ULQ0 834 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 SCML2Q9UQR0 700 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 SH3BP1Q9Y3L3 701 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 DAAM1Q9Y4D1 1078 aa7.59□□□□□ -1.19
NPLOC4-221ENST00000625705 TRANK1O15050 2925 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 HELZP42694 1942 aaKnown RBP7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 NCANO14594 1321 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 DOCK8Q8NF50 2099 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 A0A1W2PQH9 124 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 HHLA1C9JL84 531 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 FOXN3O00409 490 aaPredicted RBP7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 TNFRSF10BO14763 440 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 SART1O43290 800 aaKnown RBP7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 COCHO43405 550 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 CBFA2T2O43439 604 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 ZBED1O96006 694 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 CCDC172P0C7W6 258 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 RARGP13631 454 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 FCARP24071 287 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 SOX5P35711 763 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 ATP5C1P36542 298 aaKnown RBP7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 ACADSBP45954 432 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 PLA2G4AP47712 749 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 TUBP50607 506 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 KIF11P52732 1056 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 UBASH3AP57075 661 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 YWHAGP61981 247 aaKnown RBP eCLIP7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 GPC5P78333 572 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 FANCCQ00597 558 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 MTF1Q14872 753 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 IQCB1Q15051 598 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 DENND1BQ6P3S1 775 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 TPRG1Q6ZUI0 275 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 CCDC186Q7Z3E2 898 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 SLC47A2Q86VL8 602 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 MIB1Q86YT6 1006 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 FMNL3Q8IVF7 1028 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 MFSD6LQ8IWD5 586 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 FAM71AQ8IYT1 594 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 CPA6Q8N4T0 437 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 ZNF606Q8WXB4 792 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 DNASE1L2Q92874 299 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 USP13Q92995 863 aaPredicted RBP7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 PBXIP1Q96AQ6 731 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 ZFYVE19Q96K21 471 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 ERGIC2Q96RQ1 377 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 SLC22A12Q96S37 553 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 CDK5RAP1Q96SZ6 601 aaKnown RBP7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 TRIM62Q9BVG3 475 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 STK33Q9BYT3 514 aa7.58□□□□□ -1.2
NPLOC4-221ENST00000625705 PLA2G2FQ9BZM2 168 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms