RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 GJD2Q9UKL4 321 aa8.64□□□□□ -1.03
SND1-IT1-201ENST00000623342 PIN4Q9Y237 131 aaKnown RBP8.64□□□□□ -1.03
SND1-IT1-201ENST00000623342 CLEC11AQ9Y240 323 aa8.64□□□□□ -1.03
SND1-IT1-201ENST00000623342 SMIM28A0A1B0GU29 152 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 SLC15A5A6NIM6 579 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 IGF2BP3O00425 579 aaKnown RBP eCLIP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 XPOTO43592 962 aaKnown RBP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 DCTN3O75935 186 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 TOMM70O94826 608 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 MAP3K6O95382 1288 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 ATP6V1G2O95670 118 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 FGFR1P11362 822 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 ALADP13716 330 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 LCP1P13796 627 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 CCNB1P14635 433 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 LMO2P25791 158 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 ALDH3A1P30838 453 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 NR2C2P49116 596 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 GTF2A1P52655 376 aaPredicted RBP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 KCNJ2P63252 427 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 RIPK1Q13546 671 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 SLC45A4Q5BKX6 768 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 FAXCQ5TGI0 409 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 FAM228AQ86W67 206 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 AGGF1Q8N302 714 aaeCLIP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 ANKLE1Q8NAG6 615 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 MCUQ8NE86 351 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 THOC1Q96FV9 657 aaKnown RBP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 CFAP36Q96G28 342 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 HSFY1Q96LI6 401 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 KLF6Q99612 283 aaPredicted RBP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 VPS11Q9H270 941 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 ETNK1Q9HBU6 452 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 RNF19AQ9NV58 838 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 AP4E1Q9UPM8 1137 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 SCN4AP35499 1836 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 TRDMT1O14717 391 aaKnown RBP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 HGSO14964 777 aaPredicted RBP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 SPTLC1O15269 473 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 LPXNO60711 386 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 GCATO75600 419 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 APRTP07741 180 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 KCNE1P15382 129 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 TAF6P49848 677 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 ATXN1P54253 815 aaKnown RBP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 SLC18A2Q05940 514 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 FAAP100Q0VG06 881 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 MFSD10Q14728 455 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 XKR4Q5GH76 650 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 FAM182AQ5T1J6 154 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 FYB2Q5VWT5 728 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 ASRGL1Q7L266 308 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 OTOAQ7RTW8 1153 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 CAND1Q86VP6 1230 aaKnown RBP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 SLC26A11Q86WA9 606 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 VPS52Q8N1B4 723 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 ZNF276Q8N554 614 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 APPL2Q8NEU8 664 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 CCDC110Q8TBZ0 833 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 SLC2A14Q8TDB8 520 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 C10orf82Q8WW14 230 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 DNAJB3Q8WWF6 145 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 LRRC39Q96DD0 335 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 APOPT1Q96IL0 206 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 LRRC37BQ96QE4 947 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 MYLK2Q9H1R3 596 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 POPDC2Q9HBU9 364 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 ARHGEF3Q9NR81 526 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 TXLNGQ9NUQ3 528 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 KLK14Q9P0G3 267 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 SLC17A7Q9P2U7 560 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 ZC3H7BQ9UGR2 993 aaKnown RBP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 GTF2IRD1Q9UHL9 959 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 GNEQ9Y223 722 aaKnown RBP8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 TTLL3Q9Y4R7 772 aa8.63□□□□□ -1.03
SND1-IT1-201ENST00000623342 PDCD11Q14690 1871 aaKnown RBP8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 WDR91A4D1P6 747 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 CAPN15O75808 1086 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 ATP5HO75947 161 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 UNC5CO95185 931 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 GSTA2P09210 222 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 NEK3P51956 506 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 GBE1Q04446 702 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 SLC10A2Q12908 348 aaPredicted RBP8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 SNX17Q15036 470 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 SV2CQ496J9 727 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 EFHC1Q5JVL4 640 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 PRAMEF19Q5SWL8 479 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 TTC39BQ5VTQ0 682 aaPredicted RBP8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 STRADAQ7RTN6 431 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 LIMS2Q7Z4I7 341 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 PRPF39Q86UA1 669 aaKnown RBP8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 TMEM40Q8WWA1 233 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 ERP27Q96DN0 273 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 SERAC1Q96JX3 654 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 TNIP3Q96KP6 325 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 QKIQ96PU8 341 aaKnown RBP eCLIP8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 CSPG4P5Q96PW8 444 aa8.62□□□□□ -1.03
SND1-IT1-201ENST00000623342 KCTD15Q96SI1 283 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms