RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 IL17RAQ96F46 866 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 SEC16BQ96JE7 1060 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 ZIM3Q96PE6 472 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 ADAM33Q9BZ11 813 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 AGPAT5Q9NUQ2 364 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 TMEM51Q9NW97 253 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 RPS6KB2Q9UBS0 482 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 EIF3LQ9Y262 564 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 NCAM2O15394 837 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 LSM8O95777 96 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 SMIM10L2AP0DMW4 78 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 SMIM10L2BP0DMW5 78 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 TRPC1P48995 793 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 USP41Q3LFD5 358 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 CELF3Q5SZQ8 465 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 ZNF720Q7Z2F6 126 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 TFAP2DQ7Z6R9 452 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 RBM23Q86U06 439 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 NT5DC3Q86UY8 548 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 SYTL1Q8IYJ3 562 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 CAMKK1Q8N5S9 505 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 GRID1Q9ULK0 1009 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 ARL2BPQ9Y2Y0 163 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 MAPK1P28482 360 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 SERPINB4P48594 390 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 SPATA21Q7Z572 469 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 CCNJLQ8IV13 435 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 UPF1Q92900 1129 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 KCNB2Q92953 911 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 FICDQ9BVA6 458 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 FRMD8P1Q9BZ68 369 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 TLE6Q9H808 572 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 DDX4Q9NQI0 724 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 RBM12Q9NTZ6 932 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 CDYLQ9Y232 598 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 PSTPIP1O43586 416 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 BMP10O95393 424 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 ATP5C1P36542 298 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 NDST1P52848 882 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 ADIGQ0VDE8 80 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 DOK6Q6PKX4 331 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 IFNEQ86WN2 208 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 HOMEZQ8IX15 550 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 MS4A14Q96JA4 679 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 POP1Q99575 1024 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 RBBP8Q99708 897 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 TBC1D13Q9NVG8 400 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 GPATCH2LQ9NWQ4 482 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 SYNPO2Q9UMS6 1093 aa10.09□□□□□ -0.79
CLTCL1-211ENST00000621271 FARP2O94887 1054 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 GLP2RO95838 553 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 UBA1P22314 1058 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 MLH1P40692 756 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 BCL2L1Q07817 233 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 XRCC4Q13426 336 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 SERPINA13PQ6UXR4 307 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 DDX42Q86XP3 938 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 SLAIN1Q8ND83 568 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 KAT2BQ92831 832 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 FAM162AQ96A26 154 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 SGF29Q96ES7 293 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 FAM161BQ96MY7 647 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 CAMKK2Q96RR4 588 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 C17orf80Q9BSJ5 609 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 RBM22Q9NW64 420 aaKnown RBP eCLIP10.08□□□□□ -0.85e-6■■■■□ 22.4
CLTCL1-211ENST00000621271 RECQL4O94761 1208 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 HDCP19113 662 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 TUBP50607 506 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 YWHAZP63104 245 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 C7orf61Q8IZ16 206 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 TAS1R2Q8TE23 839 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 FAM163AQ96GL9 167 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 SLC40A1Q9NP59 571 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 INTS13Q9NVM9 706 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 TSPAN16Q9UKR8 245 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 GAKO14976 1311 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 MEI4A8MW99 385 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 FGBP02675 491 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 CHN1P15882 459 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 EIF4BP23588 611 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 GTF2E2P29084 291 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 ALDH18A1P54886 795 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 PPIGQ13427 754 aaKnown RBP eCLIP10.08□□□□□ -0.83e-7■■■■■ 32
CLTCL1-211ENST00000621271 MTM1Q13496 603 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 SETMARQ53H47 684 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 KCNT1Q5JUK3 1230 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 FAXCQ5TGI0 409 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 TTC39BQ5VTQ0 682 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 DENND1BQ6P3S1 775 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 CD99L2Q8TCZ2 262 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 RXFP2Q8WXD0 754 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 SENP8Q96LD8 212 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 TRIM51Q9BSJ1 452 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 CELF4Q9BZC1 486 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 NCF1BA6NI72 391 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 NCF1CA8MVU1 366 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 C1QTNF3-AMACRE9PGA6 284 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 FOXN3O00409 490 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 PLA2G6O60733 806 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 MAP3K6O95382 1288 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms