RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 KLRC1P26715 233 aa3.54□□□□□ -1.84
TARDBP-220ENST00000618606 SUMO3P55854 103 aaPredicted RBP3.54□□□□□ -1.84
TARDBP-220ENST00000618606 MCL1Q07820 350 aa3.54□□□□□ -1.84
TARDBP-220ENST00000618606 MANEAQ5SRI9 462 aa3.54□□□□□ -1.84
TARDBP-220ENST00000618606 USP49Q70CQ1 688 aa3.54□□□□□ -1.84
TARDBP-220ENST00000618606 OVCH2Q7RTZ1 564 aa3.54□□□□□ -1.84
TARDBP-220ENST00000618606 B4GALNT2Q8NHY0 566 aa3.54□□□□□ -1.84
TARDBP-220ENST00000618606 JPH3Q8WXH2 748 aaPredicted RBP3.54□□□□□ -1.84
TARDBP-220ENST00000618606 C22orf23Q9BZE7 217 aa3.54□□□□□ -1.84
TARDBP-220ENST00000618606 FAM83DQ9H4H8 585 aa3.54□□□□□ -1.84
TARDBP-220ENST00000618606 MLXIPLQ9NP71 852 aa3.54□□□□□ -1.84
TARDBP-220ENST00000618606 CPNE7Q9UBL6 633 aa3.54□□□□□ -1.84
TARDBP-220ENST00000618606 DKK4Q9UBT3 224 aa3.54□□□□□ -1.84
TARDBP-220ENST00000618606 EVPLQ92817 2033 aa3.54□□□□□ -1.84
TARDBP-220ENST00000618606 NOTCH3Q9UM47 2321 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.53□□□□□ -1.84
TARDBP-220ENST00000618606 E2F8A0AVK6 867 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 ISM1B1AKI9 464 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 ZNF814B7Z6K7 855 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 FOXN3O00409 490 aaPredicted RBP3.53□□□□□ -1.84
TARDBP-220ENST00000618606 RRHO14718 337 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 INPPL1O15357 1258 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 TLX3O43711 291 aaPredicted RBP3.53□□□□□ -1.84
TARDBP-220ENST00000618606 ALDH1L1O75891 902 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 RASSF9O75901 435 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 PIAS2O75928 621 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 PLAUP00749 431 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 TGFB3P10600 412 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 ADRA1DP25100 572 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 PIN1Q13526 163 aaPredicted RBP3.53□□□□□ -1.84
TARDBP-220ENST00000618606 SLC29A2Q14542 456 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 ST3GAL2Q16842 350 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 SWSAP1Q6NVH7 229 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 EPM2AIP1Q7L775 607 aaPredicted RBP3.53□□□□□ -1.84
TARDBP-220ENST00000618606 TPH2Q8IWU9 490 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 C11orf44Q8N8P7 122 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 FAM71DQ8N9W8 422 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 ZBTB34Q8NCN2 500 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 ZNF668Q96K58 619 aaPredicted RBP3.53□□□□□ -1.84
TARDBP-220ENST00000618606 NUAK2Q9H093 628 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 TMEM60Q9H2L4 133 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 USP29Q9HBJ7 922 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 SACM1LQ9NTJ5 587 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 TMEM45AQ9NWC5 275 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 STEAP1Q9UHE8 339 aa3.53□□□□□ -1.84
TARDBP-220ENST00000618606 C16orf96A6NNT2 1141 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 FRS3O43559 492 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 AKAP10O43572 662 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 SLC28A2O43868 658 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 MARCH6O60337 910 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 PRAMEF2O60811 474 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 RFPL1O75677 317 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 MBPP02686 304 aaPredicted RBP3.52□□□□□ -1.85
TARDBP-220ENST00000618606 BTF3P20290 206 aaKnown RBP3.52□□□□□ -1.85
TARDBP-220ENST00000618606 IL6STP40189 918 aaPredicted RBP3.52□□□□□ -1.85
TARDBP-220ENST00000618606 CPT1AP50416 773 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 CLCA4Q14CN2 919 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 FAM57BQ71RH2 274 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 KIAA0319LQ8IZA0 1049 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 SLC25A28Q96A46 364 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 TRMT61AQ96FX7 289 aaKnown RBP3.52□□□□□ -1.85
TARDBP-220ENST00000618606 WBP1Q96G27 269 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 ZDHHC12Q96GR4 267 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 VPS50Q96JG6 964 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 LRGUKQ96M69 825 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 ZPBPQ9BS86 351 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 GATA5Q9BWX5 397 aaPredicted RBP3.52□□□□□ -1.85
TARDBP-220ENST00000618606 RTFDC1Q9BY42 306 aaPredicted RBP3.52□□□□□ -1.85
TARDBP-220ENST00000618606 B3GNT5Q9BYG0 378 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 VPS45Q9NRW7 570 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 VPS51Q9UID3 782 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 ZNF180Q9UJW8 692 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 CAPN11Q9UMQ6 739 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 L1RE1Q9UN81 338 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 SLC27A6Q9Y2P4 619 aa3.52□□□□□ -1.85
TARDBP-220ENST00000618606 COL15A1P39059 1388 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 CAPN8A6NHC0 703 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 AQP7P3A6NL99 342 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 CTNND1O60716 968 aaKnown RBP3.51□□□□□ -1.85
TARDBP-220ENST00000618606 GAS8-AS1O95177 125 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 EPN2O95208 641 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 HOXA7P31268 230 aaPredicted RBP3.51□□□□□ -1.85
TARDBP-220ENST00000618606 COPAP53621 1224 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 ITGA8P53708 1063 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 EIF4A1P60842 406 aaKnown RBP3.51□□□□□ -1.85
TARDBP-220ENST00000618606 TXNL4AP83876 142 aaKnown RBP3.51□□□□□ -1.85
TARDBP-220ENST00000618606 DNASE1L3Q13609 305 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 KPNB1Q14974 876 aaKnown RBP3.51□□□□□ -1.85
TARDBP-220ENST00000618606 TTF1Q15361 905 aaPredicted RBP3.51□□□□□ -1.85
TARDBP-220ENST00000618606 PTPROQ16827 1216 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 APOA5Q6Q788 366 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 TFAP2DQ7Z6R9 452 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 NLRP4Q96MN2 994 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 HIST1H2AAQ96QV6 131 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 FCRL5Q96RD9 977 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 SCNM1Q9BWG6 230 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 STK31Q9BXU1 1019 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 CHST8Q9H2A9 424 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 PCDHA12Q9UN75 941 aa3.51□□□□□ -1.85
TARDBP-220ENST00000618606 TRBV5-3A0A0A0MS03 114 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms