RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 DGKKQ5KSL6 1271 aa16.79■□□□□ 0.28
BRCA1-228ENST00000618469 HEATR6Q6AI08 1181 aaKnown RBP16.79■□□□□ 0.28
BRCA1-228ENST00000618469 TADA2BQ86TJ2 420 aa16.79■□□□□ 0.28
BRCA1-228ENST00000618469 KIAA1958Q8N8K9 716 aa16.79■□□□□ 0.28
BRCA1-228ENST00000618469 IER2Q9BTL4 223 aa16.79■□□□□ 0.28
BRCA1-228ENST00000618469 SEMA4GQ9NTN9 838 aa16.79■□□□□ 0.28
BRCA1-228ENST00000618469 TAB2Q9NYJ8 693 aa16.79■□□□□ 0.28
BRCA1-228ENST00000618469 RASAL2Q9UJF2 1139 aa16.79■□□□□ 0.28
BRCA1-228ENST00000618469 CNTN6Q9UQ52 1028 aa16.79■□□□□ 0.28
BRCA1-228ENST00000618469 KIAA1549LQ6ZVL6 1849 aa16.79■□□□□ 0.28
BRCA1-228ENST00000618469 CHURC1-FNTBB4DL54 471 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 ZBED1O96006 694 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 LCP1P13796 627 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 FNTBP49356 437 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 YWHAGP61981 247 aaKnown RBP eCLIP16.78■□□□□ 0.28
BRCA1-228ENST00000618469 GRSF1Q12849 480 aaKnown RBP eCLIP16.78■□□□□ 0.28
BRCA1-228ENST00000618469 CCDC6Q16204 474 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 CNGA2Q16280 664 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 TMEM196Q5HYL7 178 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 LAIR1Q6GTX8 287 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 FSTL4Q6MZW2 842 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 KLHDC10Q6PID8 442 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 RSRC2Q7L4I2 434 aaKnown RBP16.78■□□□□ 0.28
BRCA1-228ENST00000618469 MIB1Q86YT6 1006 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 BBS7Q8IWZ6 715 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 ARHGAP18Q8N392 663 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 NETO1Q8TDF5 533 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 WBP2Q969T9 261 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 CDK5RAP1Q96SZ6 601 aaKnown RBP16.78■□□□□ 0.28
BRCA1-228ENST00000618469 P2RY13Q9BPV8 354 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 KLF16Q9BXK1 252 aaPredicted RBP16.78■□□□□ 0.28
BRCA1-228ENST00000618469 SIX2Q9NPC8 291 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 CLIC5Q9NZA1 410 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 TBC1D14Q9P2M4 693 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 DNMT3LQ9UJW3 386 aa16.78■□□□□ 0.28
BRCA1-228ENST00000618469 AJAP1Q9UKB5 411 aaPredicted RBP16.78■□□□□ 0.28
BRCA1-228ENST00000618469 BECN2A8MW95 431 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 PIK3R2O00459 728 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 TRDMT1O14717 391 aaKnown RBP16.77■□□□□ 0.28
BRCA1-228ENST00000618469 HRO43593 1189 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 LETM1O95202 739 aaPredicted RBP16.77■□□□□ 0.28
BRCA1-228ENST00000618469 ADH1CP00326 375 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 GNA15P30679 374 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 MYL5Q02045 173 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 EFEMP1Q12805 493 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 SIM2Q14190 667 aaPredicted RBP16.77■□□□□ 0.28
BRCA1-228ENST00000618469 GAS6Q14393 721 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 DHCR24Q15392 516 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 CDKAL1Q5VV42 579 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 CAVIN1Q6NZI2 390 aaKnown RBP16.77■□□□□ 0.28
BRCA1-228ENST00000618469 PRR23CQ6ZRP0 262 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 BHLHA9Q7RTU4 235 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 KCTD13Q8WZ19 329 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 SHC3Q92529 594 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 NDRG1Q92597 394 aaKnown RBP16.77■□□□□ 0.28
BRCA1-228ENST00000618469 CD101Q93033 1021 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 EXOC4Q96A65 974 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 ACP6Q9NPH0 428 aa16.77■□□□□ 0.28
BRCA1-228ENST00000618469 LSM7Q9UK45 103 aaKnown RBP16.77■□□□□ 0.28
BRCA1-228ENST00000618469 THAP12O43422 761 aa16.76■□□□□ 0.27
BRCA1-228ENST00000618469 MED7O43513 233 aa16.76■□□□□ 0.27
BRCA1-228ENST00000618469 EGFP01133 1207 aa16.76■□□□□ 0.27
BRCA1-228ENST00000618469 CCR3P51677 355 aa16.76■□□□□ 0.27
BRCA1-228ENST00000618469 TYRO3Q06418 890 aa16.76■□□□□ 0.27
BRCA1-228ENST00000618469 KRT31Q15323 416 aa16.76■□□□□ 0.27
BRCA1-228ENST00000618469 PM20D1Q6GTS8 502 aa16.76■□□□□ 0.27
BRCA1-228ENST00000618469 PMF1Q6P1K2 205 aa16.76■□□□□ 0.27
BRCA1-228ENST00000618469 SLC35F5Q8WV83 523 aa16.76■□□□□ 0.27
BRCA1-228ENST00000618469 OTUB2Q96DC9 234 aa16.76■□□□□ 0.27
BRCA1-228ENST00000618469 CNGB3Q9NQW8 809 aa16.76■□□□□ 0.27
BRCA1-228ENST00000618469 DNAJC12Q9UKB3 198 aa16.76■□□□□ 0.27
BRCA1-228ENST00000618469 RETP07949 1114 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 TPM2P07951 284 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 PNMA6AP0CW24 399 aaPredicted RBP16.75■□□□□ 0.27
BRCA1-228ENST00000618469 ADH5P11766 374 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 DRD1P21728 446 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 OPRD1P41143 372 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 GALK1P51570 392 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 DAOAP59103 153 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 RAPGEF1Q13905 1077 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 GAB4Q2WGN9 574 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 LY6G5CQ5SRR4 150 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 BTBD8Q5XKL5 378 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 DENND1BQ6P3S1 775 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.75■□□□□ 0.27
BRCA1-228ENST00000618469 ADGRG2Q8IZP9 1017 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 SYNPOQ8N3V7 929 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 SPEM1Q8N4L4 309 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 LSM14BQ9BX40 385 aaKnown RBP16.75■□□□□ 0.27
BRCA1-228ENST00000618469 FAM126AQ9BYI3 521 aaPredicted RBP16.75■□□□□ 0.27
BRCA1-228ENST00000618469 VPS16Q9H269 839 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 FBRSL1Q9HCM7 1045 aaKnown RBP16.75■□□□□ 0.27
BRCA1-228ENST00000618469 ST7Q9NRC1 585 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 FANCLQ9NW38 375 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 C2orf42Q9NWW7 574 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 STRIP2Q9ULQ0 834 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 FHOD1Q9Y613 1164 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 CNOT1A5YKK6 2376 aaKnown RBP16.75■□□□□ 0.27
BRCA1-228ENST00000618469 CHD6Q8TD26 2715 aa16.75■□□□□ 0.27
BRCA1-228ENST00000618469 YJEFN3A6XGL0 299 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms