RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 SCAPQ12770 1279 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 PSMD6Q15008 389 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 PDCD2Q16342 344 aaPredicted RBP9.06□□□□□ -0.96
GPC6-202ENST00000617456 KNOP1Q1ED39 458 aaKnown RBP9.06□□□□□ -0.96
GPC6-202ENST00000617456 DUOXA1Q1HG43 343 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 ZNF423Q2M1K9 1284 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 FILIP1LQ4L180 1135 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 PROSER1Q86XN7 944 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 ANKRD13BQ86YJ7 626 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 CEP57L1Q8IYX8 460 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 MINDY1Q8N5J2 469 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 ZSWIM2Q8NEG5 633 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 MYLPFQ96A32 169 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 SAAL1Q96ER3 474 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 HPDLQ96IR7 371 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 SPATA17Q96L03 361 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 SPATA32Q96LK8 384 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 CAMK1GQ96NX5 476 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 SYT15Q9BQS2 421 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 RNF38Q9H0F5 515 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 PDE11AQ9HCR9 933 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 AGPAT3Q9NRZ7 376 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 CFAP97Q9P2B7 532 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 SIX4Q9UIU6 781 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 CDH9Q9ULB4 789 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 CPQQ9Y646 472 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 MYOFQ9NZM1 2061 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 FREM2Q5SZK8 3169 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 ADAMTS9Q9P2N4 1935 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 GCN1Q92616 2671 aaKnown RBP9.05□□□□□ -0.96
GPC6-202ENST00000617456 GOLGA8IPA6NC78 632 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 TBC1D3BA6NDS4 549 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 GOLGA8JA6NMD2 632 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 PDXKO00764 312 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 MAPK13O15264 365 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 AP5Z1O43299 807 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 SH3BP5O60239 455 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 ADAM23O75077 832 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 ZIC2O95409 532 aaPredicted RBP9.05□□□□□ -0.96
GPC6-202ENST00000617456 SERPINF2P08697 491 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 PDGFRBP09619 1106 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 ADH5P11766 374 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 IMPDH2P12268 514 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 CD59P13987 128 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 TCF3P15923 654 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 WARSP23381 471 aaKnown RBP9.05□□□□□ -0.96
GPC6-202ENST00000617456 BDNFP23560 247 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 ANXA13P27216 316 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 GRIA2P42262 883 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 DPP6P42658 865 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 KIR2DL1P43626 348 aaPredicted RBP9.05□□□□□ -0.96
GPC6-202ENST00000617456 USP46P62068 366 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 CYP27A1Q02318 531 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 SOWAHAQ2M3V2 549 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 TSNAXIP1Q2TAA8 658 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 COL28A1Q2UY09 1125 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 SOWAHCQ53LP3 525 aaPredicted RBP9.05□□□□□ -0.96
GPC6-202ENST00000617456 RHBDF2Q6PJF5 856 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 TRAPPC11Q7Z392 1133 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 RAB44Q7Z6P3 723 aaPredicted RBP9.05□□□□□ -0.96
GPC6-202ENST00000617456 PDZD3Q86UT5 571 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 RBM12BQ8IXT5 1001 aaKnown RBP9.05□□□□□ -0.96
GPC6-202ENST00000617456 ADGRG2Q8IZP9 1017 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 EFCAB3Q8N7B9 438 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 NAT16Q8N8M0 369 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 PNPLA1Q8N8W4 532 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 CEP76Q8TAP6 659 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 SCFD1Q8WVM8 642 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 HNRNPLLQ8WVV9 542 aaKnown RBP9.05□□□□□ -0.96
GPC6-202ENST00000617456 DHX58Q96C10 678 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 MTMR12Q9C0I1 747 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 SCAND2PQ9GZW5 306 aaPredicted RBP9.05□□□□□ -0.96
GPC6-202ENST00000617456 PCIF1Q9H4Z3 704 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 GPSM3Q9Y4H4 160 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 PCDHB9Q9Y5E1 797 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 IGSF10Q6WRI0 2623 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 PTPRDP23468 1912 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 ANAPC1Q9H1A4 1944 aa9.05□□□□□ -0.96
GPC6-202ENST00000617456 SETXQ7Z333 2677 aaKnown RBP9.04□□□□□ -0.96
GPC6-202ENST00000617456 ADAMTS20P59510 1910 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 ZNF840PA6NDX5 716 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 ARHGAP33O14559 1287 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 SLC9A3R1O14745 358 aaPredicted RBP9.04□□□□□ -0.96
GPC6-202ENST00000617456 IKBKBO14920 756 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 ADH1CP00326 375 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 MBL2P11226 248 aaPredicted RBP9.04□□□□□ -0.96
GPC6-202ENST00000617456 NAT1P18440 290 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 TNNI1P19237 187 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 LMO2P25791 158 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 HOXD12P35452 270 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 TNFRSF4P43489 277 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 NOP14P78316 857 aaKnown RBP9.04□□□□□ -0.96
GPC6-202ENST00000617456 KRT85P78386 507 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 SLC7A9P82251 487 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 ZNF33AQ06730 810 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 CYP24A1Q07973 514 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 IFRD2Q12894 506 aaPredicted RBP9.04□□□□□ -0.96
GPC6-202ENST00000617456 TRIP6Q15654 476 aaKnown RBP9.04□□□□□ -0.96
GPC6-202ENST00000617456 NFIL3Q16649 462 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 SKOR2Q2VWA4 1001 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms