RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 COL4A1P02462 1669 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 KPNA6O60684 536 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 TARSP26639 723 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 NUMBP49757 651 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 STX1BP61266 288 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 ART3Q13508 389 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 FAM110CQ1W6H9 321 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 NLRP9Q7RTR0 991 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 CELF6Q96J87 481 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 CYP4F11Q9HBI6 524 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 PTPRJQ12913 1337 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 SMPD1P17405 629 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 SCNN1GP51170 649 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 FAAP100Q0VG06 881 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 KBTBD12Q3ZCT8 623 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 NAPEPLDQ6IQ20 393 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 LCLAT1Q6UWP7 414 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 MIB1Q86YT6 1006 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 SKA2Q8WVK7 121 aaPredicted RBP13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 ATP6V1E2Q96A05 226 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 PPP1R36Q96LQ0 422 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 STRA6Q9BX79 667 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 USP17L7P0C7H9 530 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 DARSP14868 501 aaKnown RBP13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 CDKN2BP42772 138 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 PTP4A2Q12974 167 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 FSCBQ5H9T9 825 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 OVOS1Q6IE37 1185 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 CYB5D1Q6P9G0 228 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 CRELD2Q6UXH1 353 aaPredicted RBP13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 TRIM67Q6ZTA4 783 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 MYLK4Q86YV6 388 aaPredicted RBP13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 LRRC52Q8N7C0 313 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 CENPTQ96BT3 561 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 HSFY1Q96LI6 401 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 PCYT2Q99447 389 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 HEY2Q9UBP5 337 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 SLC39A10Q9ULF5 831 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 MTO1Q9Y2Z2 717 aaKnown RBP13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 CDY2AQ9Y6F7 541 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 MRPL42Q9Y6G3 142 aaKnown RBP13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 ATG7O95352 703 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 LONP2Q86WA8 852 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 B3GALNT2Q8NCR0 500 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 ATXN2LQ8WWM7 1075 aaKnown RBP13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 SOCS4Q8WXH5 440 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 MAML3Q96JK9 1138 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 EIF2AQ9BY44 585 aaKnown RBP13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 KDM4CQ9H3R0 1056 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 TASP1Q9H6P5 420 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 KCNH4Q9UQ05 1017 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 TRPV2Q9Y5S1 764 aa13.63□□□□□ -0.23
PPP4R3B-206ENST00000616407 TTLL13PA6NNM8 815 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 AP3B1O00203 1094 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 PSMD3O43242 534 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 ANO4Q32M45 955 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 C1orf146Q5VVC0 180 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 LENG1Q96BZ8 264 aaPredicted RBP13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 NAT9Q9BTE0 207 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 XPNPEP3Q9NQH7 507 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 SMIM28A0A1B0GU29 152 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 RNF103O00237 685 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 CLDN5O00501 218 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 TREHO43280 583 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 CD48P09326 243 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 SKIP12755 728 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 BGNP21810 368 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 ADRA1DP25100 572 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 PGM1P36871 562 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 NR2C2P49116 596 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 ZDHHC24Q6UX98 284 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 ACAD11Q709F0 780 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 C12orf50Q8NA57 414 aaPredicted RBP13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 LPPQ93052 612 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 RMDN1Q96DB5 314 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 HAO1Q9UJM8 370 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 COL1A2P08123 1366 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 GOLGA8QA0A0J9YX86 632 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 GOLGA8OA6NCC3 632 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 GOLGA8NF8WBI6 632 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 MMP13P45452 471 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 ARHGAP1Q07960 439 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 C9orf57Q5W0N0 161 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 AGGF1Q8N302 714 aaeCLIP13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 ZNF512Q96ME7 567 aaPredicted RBP13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 TRIM56Q9BRZ2 755 aaKnown RBP13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 NRDE2Q9H7Z3 1164 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 POPDC2Q9HBU9 364 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 ETNK2Q9NVF9 386 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 LOC102724159A0A0B4J2E5 919 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 FOXO6A8MYZ6 492 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 NPR3P17342 541 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 BDNFP23560 247 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 NOS2P35228 1153 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 RPA3P35244 121 aaPredicted RBP13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 ASPAP45381 313 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 CPA2P48052 419 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 SNX17Q15036 470 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms