RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 VAT1Q99536 393 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 WDR18Q9BV38 432 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 UPP2O95045 317 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 PRKAA2P54646 552 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 EFEMP1Q12805 493 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 ARHGEF19Q8IW93 802 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 ZNF333Q96JL9 665 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 PHTF1Q9UMS5 762 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 HOXB8P17481 243 aaPredicted RBP9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 ACTN3Q08043 901 aaPredicted RBP9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 NT5DC3Q86UY8 548 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 ZCCHC9Q8N567 271 aaKnown RBP9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 APOPT1Q96IL0 206 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 PPP1R36Q96LQ0 422 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 CPNE1Q99829 537 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 TMEM121Q9BTD3 319 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 EML1O00423 815 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 FGF10O15520 208 aaPredicted RBP9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 WASHC5Q12768 1159 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 FLOT2Q14254 428 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 FSCN1Q16658 493 aaKnown RBP9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 CELF3Q5SZQ8 465 aaKnown RBP9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 PLPPR4Q7Z2D5 763 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 UROC1Q96N76 676 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 TLR10Q9BXR5 811 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 L1RE1Q9UN81 338 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 EIF3LQ9Y262 564 aaKnown RBP9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 TRIOBPQ9H2D6 2365 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 ERI2A8K979 691 aaKnown RBP9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 MEIS2O14770 477 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 YWHAZP63104 245 aaKnown RBP9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 KCNT1Q5JUK3 1230 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 GANQ9H2C0 597 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 BATF3Q9NR55 127 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 SETD4Q9NVD3 440 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 TRPV2Q9Y5S1 764 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 APOC4-APOC2K7ER74 178 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 AKAP10O43572 662 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 CABYRO75952 493 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 APOC2P02655 101 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 GLI1P08151 1106 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 KCNA4P22459 653 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 DSG1Q02413 1049 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 TMEM259Q4ZIN3 620 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 CDR2LQ86X02 465 aaPredicted RBP9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 B2RBV5 119 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 MICAL2O94851 1124 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 CALB2P22676 271 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 PSEN2P49810 448 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 TMCO4Q5TGY1 634 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 ARID3BQ8IVW6 561 aaPredicted RBP9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 TNFSF13BQ9Y275 285 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 IPPQ9Y573 584 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 COL1A2P08123 1366 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 CNTNAP2Q9UHC6 1331 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 AIM2O14862 343 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 SKOR1P84550 965 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 SCARA3Q6AZY7 606 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 DNAJC9Q8WXX5 260 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 RIN2Q8WYP3 895 aaPredicted RBP9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 FICDQ9BVA6 458 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 CLPBQ9H078 707 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 ZNF556Q9HAH1 456 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 ENTPD7Q9NQZ7 604 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 PCDHB5Q9Y5E4 795 aa9.4□□□□□ -0.91
SPTBN1-207ENST00000615901 NDST1P52848 882 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 SOX10P56693 466 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 STRA8Q7Z7C7 330 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 STX19Q8N4C7 294 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 ANKRD27Q96NW4 1050 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 VPS28Q9UK41 221 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 SOX13Q9UN79 622 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 ADGRA2Q96PE1 1338 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 LACTBL1A8MY62 500 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 ASMTLO95671 621 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 ENO3P13929 434 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 ACADSP16219 412 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 VCLP18206 1134 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 HPCAP84074 193 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 SPANXN3Q5MJ09 141 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 SEL1L3Q68CR1 1132 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 LRRC34Q8IZ02 419 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 ETNPPLQ8TBG4 499 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 KLF6Q99612 283 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 NRCAMQ92823 1304 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 CHRM3P20309 590 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 HTR3CQ8WXA8 447 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 TUBGCP4Q9UGJ1 667 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 PCDHB12Q9Y5F1 795 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 SLC15A5A6NIM6 579 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 EFCAB14O75071 495 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 CREMQ03060 361 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 TMED1Q13445 227 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 VGLL4Q14135 290 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 CEP70Q8NHQ1 597 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 ATXN2LQ8WWM7 1075 aaKnown RBP9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 DTNBP1Q96EV8 351 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 CDCA5Q96FF9 252 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 NEUROG2Q9H2A3 272 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 NCKIPSDQ9NZQ3 722 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms