RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ZNF366Q8N895 744 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 CCDC150Q8NCX0 1101 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 SPATA18Q8TC71 538 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 OSCP1Q8WVF1 389 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 CPA5Q8WXQ8 436 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 SHC3Q92529 594 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 NXPE3Q969Y0 559 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 CBX8Q9HC52 389 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 ARHGAP26Q9UNA1 814 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 SCML2Q9UQR0 700 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 ZFP37Q9Y6Q3 630 aaPredicted RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 K7EQS6 105 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 ZBED1O96006 694 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 GCNT1Q02742 428 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 PTPN20Q4JDL3 420 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 DGKKQ5KSL6 1271 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 SH3PXD2AQ5TCZ1 1133 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 CACUL1Q86Y37 369 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 DDX1Q92499 740 aaKnown RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 PCDHB18PQ96TA0 734 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 NACA2Q9H009 215 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 MTG2Q9H4K7 406 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 SPATA6Q9NWH7 488 aaPredicted RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 PRRT4C9JH25 899 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 VDRP11473 427 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 CHRNB2P17787 502 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 RNASE9P60153 205 aaKnown RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 SLC7A9P82251 487 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 CSTF1Q05048 431 aaKnown RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 BST2Q10589 180 aaKnown RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 NFKBIBQ15653 356 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 STX1AQ16623 288 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 ANO4Q32M45 955 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 DAB2IPQ5VWQ8 1189 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 ZNF852Q6ZMS4 543 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 CIR1Q86X95 450 aaPredicted RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 LEMD2Q8NC56 503 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 CSGALNACT1Q8TDX6 532 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 TAS2R14Q9NYV8 317 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 CNTN6Q9UQ52 1028 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 SLC12A8A0AV02 714 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 NEDD8-MDP1E9PL57 170 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 XPO1O14980 1071 aaKnown RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 CHRM1P11229 460 aaPredicted RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 SLC6A4P31645 630 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 PLA2G4AP47712 749 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 DAOAP59103 153 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 MYL5Q02045 173 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 ITPRIPL2Q3MIP1 535 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 C1orf210Q8IVY1 113 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 CFAP52Q8N1V2 620 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 RPLP0P6Q8NHW5 317 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 HHIPQ96QV1 700 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 CYLDQ9NQC7 956 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 UXTQ9UBK9 157 aaPredicted RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 AGO1Q9UL18 857 aaKnown RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 NCOR2Q9Y618 2525 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 PMM2O15305 246 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 STX10O60499 249 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 GNA14O95837 355 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 CORO1AP31146 461 aaKnown RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 ZNF165P49910 485 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 CLCN5P51795 746 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 UBXN1Q04323 297 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 CNGA2Q16280 664 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 OTUD1Q5VV17 481 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 TMEM215Q68D42 235 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 PM20D1Q6GTS8 502 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 NADSYN1Q6IA69 706 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 CC2D1AQ6P1N0 951 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 TMEM92Q6UXU6 159 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 FMNL3Q8IVF7 1028 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 FAM160A2Q8N612 972 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 EMC1Q8N766 993 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 DEPDC1BQ8WUY9 529 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 RLN3Q8WXF3 142 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 ATOH1Q92858 354 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 SMOC1Q9H4F8 434 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 HCN4Q9Y3Q4 1203 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 RAD54BQ9Y620 910 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 BPTFQ12830 3046 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 ZZEF1O43149 2961 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 DOCK9Q9BZ29 2069 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 CACNA1EQ15878 2313 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 F8VZ95 297 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 GOLGA6L22H0YM25 854 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 GALR2O43603 387 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 MOCS2O96007 188 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 FAM163BP0C2L3 166 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 CYP11B1P15538 503 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 TBXAS1P24557 533 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 TIE1P35590 1138 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 ATP5C1P36542 298 aaKnown RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 BCAT1P54687 386 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 KLHL40Q2TBA0 621 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 SNX30Q5VWJ9 437 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 FAM183BPQ6ZVS7 135 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 CCDC186Q7Z3E2 898 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 FAM71AQ8IYT1 594 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms